31 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSLCAP00010018787	Histone H3; Belongs to the histone H3 family. (117 aa)
	ccne1	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (433 aa)
	pole	DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2296 aa)
	LOC108872509	Histone H3; Belongs to the histone H3 family. (136 aa)
	ccna2	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (436 aa)
	ENSLCAP00010050497	Histone H3; Belongs to the histone H3 family. (90 aa)
	PLK1	Serine/threonine-protein kinase PLK. (569 aa)
	cdc7	Protein kinase domain-containing protein. (610 aa)
	gins1	Sld5 domain-containing protein. (196 aa)
	timeless	Uncharacterized protein. (1251 aa)
	cdk2-2	Cyclin-dependent kinase 2. (298 aa)
	ENSLCAP00010041597	Histone H3; Belongs to the histone H3 family. (88 aa)
	ENSLCAP00010031718	DNA topoisomerase II binding protein 1. (1435 aa)
	ENSLCAP00010029530	Histone H3; Belongs to the histone H3 family. (98 aa)
	ENSLCAP00010029507	Histone H3; Belongs to the histone H3 family. (125 aa)
	cdc20	WD_REPEATS_REGION domain-containing protein. (502 aa)
	Cdk1	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (331 aa)
	Cdc25b	Rhodanese domain-containing protein. (385 aa)
	ENSLCAP00010026403	Histone H3; Belongs to the histone H3 family. (107 aa)
	ENSLCAP00010026315	Histone H3; Belongs to the histone H3 family. (98 aa)
	slbp	SLBP_RNA_bind domain-containing protein. (283 aa)
	dbf4	Uncharacterized protein. (628 aa)
	LOC108901713	Uncharacterized protein. (1066 aa)
	mtbp	Uncharacterized protein. (883 aa)
	foxm1	Fork-head domain-containing protein. (678 aa)
	wee1	Wee1-like protein kinase. (620 aa)
	cdc45	Uncharacterized protein. (568 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (260 aa)
	ENSLCAP00010008183	RecQ helicase-like 4. (1236 aa)
	LOC108884115	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (427 aa)
	cdk2	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (298 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cdc25b	Cdk1	ENSLCAP00010028000	ENSLCAP00010028139	Rhodanese domain-containing protein.	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	0.988
Cdc25b	LOC108884115	ENSLCAP00010028000	ENSLCAP00010008465	Rhodanese domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.401
Cdc25b	PLK1	ENSLCAP00010028000	ENSLCAP00010049256	Rhodanese domain-containing protein.	Serine/threonine-protein kinase PLK.	0.990
Cdc25b	ccna2	ENSLCAP00010028000	ENSLCAP00010056469	Rhodanese domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.858
Cdc25b	ccne1	ENSLCAP00010028000	ENSLCAP00010020590	Rhodanese domain-containing protein.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.842
Cdc25b	cdc20	ENSLCAP00010028000	ENSLCAP00010028455	Rhodanese domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.546
Cdc25b	cdc45	ENSLCAP00010028000	ENSLCAP00010007031	Rhodanese domain-containing protein.	Uncharacterized protein.	0.495
Cdc25b	cdk2	ENSLCAP00010028000	ENSLCAP00010014041	Rhodanese domain-containing protein.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.810
Cdc25b	cdk2-2	ENSLCAP00010028000	ENSLCAP00010044385	Rhodanese domain-containing protein.	Cyclin-dependent kinase 2.	0.810
Cdc25b	foxm1	ENSLCAP00010028000	ENSLCAP00010005535	Rhodanese domain-containing protein.	Fork-head domain-containing protein.	0.838
Cdc25b	wee1	ENSLCAP00010028000	ENSLCAP00010005543	Rhodanese domain-containing protein.	Wee1-like protein kinase.	0.881
Cdk1	Cdc25b	ENSLCAP00010028139	ENSLCAP00010028000	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Rhodanese domain-containing protein.	0.988
Cdk1	LOC108884115	ENSLCAP00010028139	ENSLCAP00010008465	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.	0.702
Cdk1	PLK1	ENSLCAP00010028139	ENSLCAP00010049256	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Serine/threonine-protein kinase PLK.	0.973
Cdk1	ccna2	ENSLCAP00010028139	ENSLCAP00010056469	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.992
Cdk1	ccne1	ENSLCAP00010028139	ENSLCAP00010020590	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.	0.815
Cdk1	cdc20	ENSLCAP00010028139	ENSLCAP00010028455	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	WD_REPEATS_REGION domain-containing protein.	0.826
Cdk1	cdc45	ENSLCAP00010028139	ENSLCAP00010007031	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.688
Cdk1	cdc7	ENSLCAP00010028139	ENSLCAP00010048952	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Protein kinase domain-containing protein.	0.705
Cdk1	dbf4	ENSLCAP00010028139	ENSLCAP00010003550	Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily.	Uncharacterized protein.	0.540