STRINGSTRING
got1 got1 hdac1 hdac1 ENSLCAP00010013378 ENSLCAP00010013378 ENSLCAP00010014063 ENSLCAP00010014063 bax bax LOC108882658 LOC108882658 idh1 idh1 bcl2 bcl2 ENSLCAP00010027354 ENSLCAP00010027354 ENSLCAP00010033268 ENSLCAP00010033268 Ache Ache LOC108877511 LOC108877511 LOC108882983 LOC108882983 ENSLCAP00010037861 ENSLCAP00010037861 GOT1 GOT1 pc pc LOC108892827 LOC108892827 GPT GPT endog endog HDAC2 HDAC2 Idh2 Idh2 Hdac3 Hdac3 CASP3 CASP3 LOC108897725 LOC108897725 ENSLCAP00010059112 ENSLCAP00010059112 casp9 casp9 LOC108887082 LOC108887082 LOC108872926 LOC108872926 got2 got2 LOC108884044 LOC108884044
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
got1Aspartate aminotransferase. (410 aa)
hdac1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (482 aa)
ENSLCAP00010013378Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (623 aa)
ENSLCAP00010014063Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (945 aa)
baxUncharacterized protein. (192 aa)
LOC108882658Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1008 aa)
idh1Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (428 aa)
bcl2BH4_2 domain-containing protein. (229 aa)
ENSLCAP00010027354Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (481 aa)
ENSLCAP00010033268Si:ch73-89b15.3. (351 aa)
AcheCarboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family. (646 aa)
LOC108877511Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (104 aa)
LOC108882983Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (105 aa)
ENSLCAP00010037861Caspase 3, apoptosis-related cysteine peptidase a; Belongs to the peptidase C14A family. (279 aa)
GOT1Aspartate aminotransferase. (467 aa)
pcPyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. (1188 aa)
LOC108892827Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1098 aa)
GPTAminotran_1_2 domain-containing protein. (568 aa)
endogEndonuclease. (299 aa)
HDAC2Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (507 aa)
Idh2Isocitrate dehydrogenase 2 (NADP+), mitochondrial. (592 aa)
Hdac3Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (459 aa)
CASP3Caspase 3, apoptosis-related cysteine peptidase b; Belongs to the peptidase C14A family. (259 aa)
LOC108897725Uncharacterized protein; Belongs to the cytochrome P450 family. (521 aa)
ENSLCAP00010059112Caspase 8, apoptosis-related cysteine peptidase, like 2; Belongs to the peptidase C14A family. (647 aa)
casp9Uncharacterized protein; Belongs to the peptidase C14A family. (457 aa)
LOC108887082Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (1112 aa)
LOC108872926Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. (104 aa)
got2Aspartate aminotransferase. (428 aa)
LOC108884044Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (962 aa)
Your Current Organism:
Lates calcarifer
NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch
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