26 items (Lates calcarifer) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC108884165	Tyrosine-protein kinase receptor. (1389 aa)
	kras	Uncharacterized protein. (189 aa)
	plin2	Perilipin; Belongs to the perilipin family. (443 aa)
	ENSLCAP00010036920	Lipase, hormone-sensitive a. (696 aa)
	LOC108894950	Uncharacterized protein. (380 aa)
	LOC108873145	Myostatin-2. (359 aa)
	LOC108891453	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (519 aa)
	PPARG	Uncharacterized protein. (552 aa)
	cd63	Tetraspanin. (240 aa)
	mstn	TGF_BETA_2 domain-containing protein. (376 aa)
	kl	Uncharacterized protein. (977 aa)
	ENSLCAP00010058905	Melanocortin 4 receptor. (323 aa)
	Apln	Uncharacterized protein. (82 aa)
	adipor1	Uncharacterized protein. (376 aa)
	lipe	Uncharacterized protein. (867 aa)
	LOC108873407	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (306 aa)
	ENSLCAP00010006438	CD36 molecule (thrombospondin receptor); Belongs to the CD36 family. (451 aa)
	Gprc6a	G protein-coupled receptor, class C, group 6, member A. (924 aa)
	LOC108886221	Uncharacterized protein; Belongs to the heparin-binding growth factors family. (261 aa)
	LOC108874503	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (530 aa)
	SMAD4	Mothers against decapentaplegic homolog. (524 aa)
	inhba	TGF_BETA_2 domain-containing protein. (400 aa)
	trh	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems. (270 aa)
	myog	BHLH domain-containing protein. (258 aa)
	smad3	Mothers against decapentaplegic homolog. (449 aa)
	dcn	Decorin; May affect the rate of fibrils formation. (362 aa)

Your Current Organism:

Lates calcarifer

NCBI taxonomy Id: 8187
Other names: Asian seabass, Holocentrus calcarifer, L. calcarifer, barramundi, barramundi perch

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Apln	ENSLCAP00010036920	ENSLCAP00010054608	ENSLCAP00010036920	Uncharacterized protein.	Lipase, hormone-sensitive a.	0.421
Apln	lipe	ENSLCAP00010054608	ENSLCAP00010000142	Uncharacterized protein.	Uncharacterized protein.	0.421
ENSLCAP00010006438	PPARG	ENSLCAP00010006438	ENSLCAP00010044435	CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.	Uncharacterized protein.	0.554
ENSLCAP00010006438	plin2	ENSLCAP00010006438	ENSLCAP00010036550	CD36 molecule (thrombospondin receptor); Belongs to the CD36 family.	Perilipin; Belongs to the perilipin family.	0.440
ENSLCAP00010036920	Apln	ENSLCAP00010036920	ENSLCAP00010054608	Lipase, hormone-sensitive a.	Uncharacterized protein.	0.421
ENSLCAP00010036920	lipe	ENSLCAP00010036920	ENSLCAP00010000142	Lipase, hormone-sensitive a.	Uncharacterized protein.	0.902
ENSLCAP00010036920	plin2	ENSLCAP00010036920	ENSLCAP00010036550	Lipase, hormone-sensitive a.	Perilipin; Belongs to the perilipin family.	0.471
ENSLCAP00010058905	trh	ENSLCAP00010058905	ENSLCAP00010020811	Melanocortin 4 receptor.	Pro-thyrotropin-releasing hormone; Functions as a regulator of the biosynthesis of TSH in the anterior pituitary gland and as a neurotransmitter/ neuromodulator in the central and peripheral nervous systems.	0.613
LOC108873145	LOC108874503	ENSLCAP00010041388	ENSLCAP00010007280	Myostatin-2.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.507
LOC108873145	LOC108891453	ENSLCAP00010041388	ENSLCAP00010043400	Myostatin-2.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.948
LOC108873145	mstn	ENSLCAP00010041388	ENSLCAP00010049089	Myostatin-2.	TGF_BETA_2 domain-containing protein.	0.902
LOC108873145	myog	ENSLCAP00010041388	ENSLCAP00010025654	Myostatin-2.	BHLH domain-containing protein.	0.665
LOC108873407	PPARG	ENSLCAP00010003232	ENSLCAP00010044435	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	Uncharacterized protein.	0.499
LOC108874503	LOC108873145	ENSLCAP00010007280	ENSLCAP00010041388	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Myostatin-2.	0.507
LOC108874503	SMAD4	ENSLCAP00010007280	ENSLCAP00010013760	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Mothers against decapentaplegic homolog.	0.583
LOC108874503	inhba	ENSLCAP00010007280	ENSLCAP00010013888	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	TGF_BETA_2 domain-containing protein.	0.965
LOC108874503	mstn	ENSLCAP00010007280	ENSLCAP00010049089	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	TGF_BETA_2 domain-containing protein.	0.542
LOC108874503	smad3	ENSLCAP00010007280	ENSLCAP00010026768	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Mothers against decapentaplegic homolog.	0.471
LOC108884165	LOC108886221	ENSLCAP00010034632	ENSLCAP00010006787	Tyrosine-protein kinase receptor.	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	0.653
LOC108886221	LOC108884165	ENSLCAP00010006787	ENSLCAP00010034632	Uncharacterized protein; Belongs to the heparin-binding growth factors family.	Tyrosine-protein kinase receptor.	0.653