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rpl16 rpl16 Rps19 Rps19 rps7 rps7 rpl2 rpl2 rpl22 rpl22 Rps3 Rps3 rpl14 rpl14 rps8 rps8 rpl20 rpl20 rps18 rps18 rps14 rps14 Rps16 Rps16 D7KSJ3_ARALL D7KSJ3_ARALL D7KUM3_ARALL D7KUM3_ARALL D7LH15_ARALL D7LH15_ARALL D7M7P0_ARALL D7M7P0_ARALL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
rpl1650S ribosomal protein L16, chloroplastic; Belongs to the universal ribosomal protein uL16 family. (135 aa)
Rps19Predicted protein; Belongs to the universal ribosomal protein uS19 family. (49 aa)
rps730S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. (155 aa)
rpl250S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family. (274 aa)
rpl2250S ribosomal protein L22, chloroplastic; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome; Belongs to the universal ribosomal protein uL22 family. (160 aa)
Rps3KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (160 aa)
rpl1450S ribosomal protein L14, chloroplastic; Binds to 23S rRNA. (122 aa)
rps830S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit. (134 aa)
rpl2050S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (117 aa)
rps1830S ribosomal protein S18, chloroplastic; Belongs to the bacterial ribosomal protein bS18 family. (101 aa)
rps1430S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles. (100 aa)
Rps16Ribosomal protein S16. (79 aa)
D7KSJ3_ARALLUncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (208 aa)
D7KUM3_ARALLUncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (154 aa)
D7LH15_ARALLUncharacterized protein. (164 aa)
D7M7P0_ARALLRibosomal protein S7. (148 aa)
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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