STRINGSTRING
RPL12-A RPL12-A D7KBJ9_ARALL D7KBJ9_ARALL NTH1 NTH1 D7KFC2_ARALL D7KFC2_ARALL D7KFQ9_ARALL D7KFQ9_ARALL D7KK29_ARALL D7KK29_ARALL D7KKS3_ARALL D7KKS3_ARALL D7KMN8_ARALL D7KMN8_ARALL D7KQX7_ARALL D7KQX7_ARALL Rps3 Rps3 rpoA rpoA RpoB RpoB rpoC2 rpoC2 D7KRE3_ARALL D7KRE3_ARALL D7KRR9_ARALL D7KRR9_ARALL D7KRT2_ARALL D7KRT2_ARALL D7KRT3_ARALL D7KRT3_ARALL D7KS57_ARALL D7KS57_ARALL D7KTF1_ARALL D7KTF1_ARALL D7KWZ2_ARALL D7KWZ2_ARALL D7KX53_ARALL D7KX53_ARALL D7L0L8_ARALL D7L0L8_ARALL D7L115_ARALL D7L115_ARALL D7L234_ARALL D7L234_ARALL D7L5Z1_ARALL D7L5Z1_ARALL D7L7S8_ARALL D7L7S8_ARALL D7L923_ARALL D7L923_ARALL D7LA34_ARALL D7LA34_ARALL NTH1-2 NTH1-2 D7LEA6_ARALL D7LEA6_ARALL D7LEV2_ARALL D7LEV2_ARALL D7LF10_ARALL D7LF10_ARALL D7LF91_ARALL D7LF91_ARALL D7LH29_ARALL D7LH29_ARALL ARP ARP D7LH98_ARALL D7LH98_ARALL D7LHG1_ARALL D7LHG1_ARALL D7LME8_ARALL D7LME8_ARALL D7LN50_ARALL D7LN50_ARALL D7LP32_ARALL D7LP32_ARALL D7LQ57_ARALL D7LQ57_ARALL D7LRX6_ARALL D7LRX6_ARALL D7LUQ2_ARALL D7LUQ2_ARALL D7LXK6_ARALL D7LXK6_ARALL D7M1Q5_ARALL D7M1Q5_ARALL D7M201_ARALL D7M201_ARALL D7M329_ARALL D7M329_ARALL D7M7E2_ARALL D7M7E2_ARALL D7MDA7_ARALL D7MDA7_ARALL D7MDS7_ARALL D7MDS7_ARALL D7MFK2_ARALL D7MFK2_ARALL D7MG35_ARALL D7MG35_ARALL D7MG48_ARALL D7MG48_ARALL D7MGJ5_ARALL D7MGJ5_ARALL D7MHC6_ARALL D7MHC6_ARALL D7MHC8_ARALL D7MHC8_ARALL D7MLP3_ARALL D7MLP3_ARALL D7MMG6_ARALL D7MMG6_ARALL D7MQX3_ARALL D7MQX3_ARALL D7MT95_ARALL D7MT95_ARALL D7MTG0_ARALL D7MTG0_ARALL D7MTR0_ARALL D7MTR0_ARALL D7MXZ5_ARALL D7MXZ5_ARALL
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RPL12-ARibosomal protein L12-A. (184 aa)
D7KBJ9_ARALLATWHY1/PTAC1. (264 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (384 aa)
D7KFC2_ARALLRibokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. (380 aa)
D7KFQ9_ARALLKH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (160 aa)
D7KK29_ARALLUncharacterized protein. (328 aa)
D7KKS3_ARALLUncharacterized protein. (180 aa)
D7KMN8_ARALLPredicted protein. (59 aa)
D7KQX7_ARALLUncharacterized protein. (329 aa)
Rps3KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (160 aa)
rpoADNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (327 aa)
RpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1763 aa)
rpoC2DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1379 aa)
D7KRE3_ARALLPredicted protein. (161 aa)
D7KRR9_ARALLKH type-2 domain-containing protein. (109 aa)
D7KRT2_ARALLPredicted protein. (62 aa)
D7KRT3_ARALLPredicted protein. (154 aa)
D7KS57_ARALLSmr domain-containing protein. (863 aa)
D7KTF1_ARALLPDE316. (767 aa)
D7KWZ2_ARALLPfkB-type carbohydrate kinase family protein. (612 aa)
D7KX53_ARALLPTAC17. (437 aa)
D7L0L8_ARALLUncharacterized protein. (229 aa)
D7L115_ARALLUncharacterized protein. (74 aa)
D7L234_ARALLSAP domain-containing protein. (914 aa)
D7L5Z1_ARALLThioredoxin domain-containing protein. (183 aa)
D7L7S8_ARALLPTAC13. (337 aa)
D7L923_ARALLDNA gyrase subunit A family protein. (950 aa)
D7LA34_ARALLUncharacterized protein. (317 aa)
NTH1-2Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (354 aa)
D7LEA6_ARALLRAP domain-containing protein. (668 aa)
D7LEV2_ARALLUncharacterized protein. (287 aa)
D7LF10_ARALLPTAC18. (139 aa)
D7LF91_ARALLCAAD domain-containing protein. (177 aa)
D7LH29_ARALLPTAC12. (527 aa)
ARPDNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (550 aa)
D7LH98_ARALLDNA-(apurinic or apyrimidinic site) lyase; Belongs to the DNA repair enzymes AP/ExoA family. (430 aa)
D7LHG1_ARALLUncharacterized protein. (325 aa)
D7LME8_ARALLUncharacterized protein. (199 aa)
D7LN50_ARALLPTAC16. (510 aa)
D7LP32_ARALLRibosomal_S3_C domain-containing protein. (79 aa)
D7LQ57_ARALLATWHY3/PTAC11. (268 aa)
D7LRX6_ARALLPDE312/PTAC10. (675 aa)
D7LUQ2_ARALLPfkB-type carbohydrate kinase family protein. (477 aa)
D7LXK6_ARALLUncharacterized protein. (642 aa)
D7M1Q5_ARALLUncharacterized protein. (263 aa)
D7M201_ARALLUncharacterized protein. (722 aa)
D7M329_ARALLPDE225/PTAC7. (161 aa)
D7M7E2_ARALLUncharacterized protein. (91 aa)
D7MDA7_ARALLUncharacterized protein. (336 aa)
D7MDS7_ARALLChloroplast small heat shock protein; Belongs to the small heat shock protein (HSP20) family. (226 aa)
D7MFK2_ARALLElongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis. (476 aa)
D7MG35_ARALLPTAC14. (483 aa)
D7MG48_ARALLUncharacterized protein. (365 aa)
D7MGJ5_ARALLSuperoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (215 aa)
D7MHC6_ARALLUncharacterized protein. (118 aa)
D7MHC8_ARALLPredicted protein. (394 aa)
D7MLP3_ARALLUncharacterized protein. (397 aa)
D7MMG6_ARALLGTP binding protein. (427 aa)
D7MQX3_ARALLUncharacterized protein. (305 aa)
D7MT95_ARALLUncharacterized protein. (172 aa)
D7MTG0_ARALLPentatricopeptide repeat-containing protein. (711 aa)
D7MTR0_ARALLPTAC15. (500 aa)
D7MXZ5_ARALLUncharacterized protein. (137 aa)
Your Current Organism:
Arabidopsis lyrata
NCBI taxonomy Id: 81972
Other names: A. lyrata subsp. lyrata, Arabidopsis lyrata subsp. lyrata, Arabis lyrata, Arabis lyrata subsp. lyrata, Cardaminopsis lyrata
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