124 items (Bacteroides uniformis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CUP26657.1	Family of uncharacterised function (DUF490). (1490 aa)
	CUP27266.1	Tetratricopeptide repeat. (413 aa)
	rssA_1	Patatin. (776 aa)
	CUP27696.1	Uncharacterised protein. (149 aa)
	lptG	Permease YjgP/YjgQ family protein. (378 aa)
	CUP36080.1	Surface antigen (D15). (769 aa)
	CUP36135.1	Uncharacterised protein. (111 aa)
	CUP36172.1	Putative lipoprotein. (308 aa)
	lspA	Putative signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family. (210 aa)
	yocK	Putative regulatory protein. (126 aa)
	CUP38584.1	Protein of uncharacterised function (DUF3078). (466 aa)
	CUP41680.1	Protein of uncharacterised function (DUF1573). (131 aa)
	CUP43013.1	Peptidoglycan-binding lysin domain protein. (596 aa)
	CUP43047.1	Uncharacterised protein. (233 aa)
	CUP43072.1	Uncharacterised protein. (153 aa)
	bamD	Outer membrane assembly lipoprotein YfiO. (273 aa)
	CUP53840.1	Septum formation initiator. (102 aa)
	CUP54121.1	Permease YjgP/YjgQ family protein. (633 aa)
	CUP54147.1	Activator of Hsp90 ATPase homolog 1-like protein. (128 aa)
	CUP61093.1	Polyketide cyclase / dehydrase and lipid transport. (136 aa)
	RecX	Regulatory protein RecX; Modulates RecA activity; Belongs to the RecX family. (159 aa)
	CUP61304.1	Uncharacterised protein. (454 aa)
	bamA	Outer membrane protein assembly complex%2C YaeT protein. (879 aa)
	CUP61380.1	Outer membrane chaperone Skp. (171 aa)
	lolD_2	ABC transporter related protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family. (219 aa)
	CUP62767.1	Uncharacterised protein. (282 aa)
	CUP64216.1	Protein of uncharacterised function (DUF3316). (284 aa)
	CUP64244.1	Peptidase S41. (338 aa)
	CUP65609.1	Cell division protein FtsQ. (245 aa)
	CUP65789.1	Protein of uncharacterised function (DUF3109). (193 aa)
	CUP67040.1	Putative transmembrane protein. (220 aa)
	CUP68060.1	Putative TPR-repeat protein. (1014 aa)
	CUP68088.1	TonB-dependent receptor. (543 aa)
	CUP69170.1	Bacterial membrane protein YfhO. (836 aa)
	lolE_1	Putative lipoprotein releasing system transmembrane protein. (411 aa)
	CUP69317.1	Tetratricopeptide repeat. (564 aa)
	CUP69346.1	Alkyl hydroperoxide reductase. (357 aa)
	CUP72472.1	Protein of uncharacterised function (DUF2723). (1114 aa)
	metN	ABC transporter related protein. (256 aa)
	mlaE	ABC-type transport system involved in resistance to organic solvents%2C permease component. (247 aa)
	lptB_2	ABC transporter ATP-binding protein. (281 aa)
	prsA3	PpiC-type peptidyl-prolyl cis-trans isomerase. (520 aa)
	CUP78154.1	Uncharacterised protein. (282 aa)
	surA	PpiC-type peptidyl-prolyl cis-trans isomerase. (455 aa)
	CUP78208.1	Organic solvent tolerance protein OstA. (573 aa)
	CUP78234.1	Uncharacterised protein. (96 aa)
	CUP79655.1	TonB. (672 aa)
	blaI	Transcriptional regulator. (120 aa)
	CUP79943.1	Uncharacterised protein. (292 aa)
	CUP81589.1	Uncharacterised protein. (203 aa)
	CUP83259.1	Mammalian cell entry related domain protein. (297 aa)
	CUP83302.1	Sodium-dependent transporter. (317 aa)
	CUP83562.1	Organic solvent tolerance protein OstA. (925 aa)
	CUP85981.1	Putative lipoprotein. (276 aa)
	CUP87043.1	Uncharacterised protein. (206 aa)
	CUP88480.1	Uncharacterised protein. (803 aa)
	CUP89015.1	Uncharacterised protein. (366 aa)
	CUP89112.1	Putative outer membrane protein. (420 aa)
	CUP89127.1	Tetratricopeptide repeat. (441 aa)
	lptC	Protein of uncharacterised function (DUF1239). (208 aa)
	tlyC	Putative transmembrane CBS domain transporter. (418 aa)
	CUP89188.1	Peptidyl-prolyl cis-trans isomerase. (712 aa)
	rlmN	23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (346 aa)
	CUP89233.1	Uncharacterised protein. (351 aa)
	CUP89294.1	Uncharacterised protein. (174 aa)
	CUP89314.1	Uncharacterised protein. (257 aa)
	CUP89353.1	Major facilitator superfamily MFS_1. (463 aa)
	CUP89375.1	Coenzyme PQQ synthesis protein D (PqqD). (117 aa)
	CUP89403.1	Uncharacterised protein. (349 aa)
	CUP91411.1	SCO1/SenC. (143 aa)
	CUP96818.1	Uncharacterised protein. (402 aa)
	CUP97848.1	Uncharacterized protein involved in methicillin resistance. (327 aa)
	CUP97968.1	Predicted O-linked N-acetylglucosamine transferase%2C SPINDLY family. (730 aa)
	CUP97992.1	Phosphate-selective porin O and P. (341 aa)
	CUP98577.1	Uncharacterised protein. (77 aa)
	CUP98602.1	Outer membrane chaperone Skp. (200 aa)
	CUQ00797.1	Band 7 protein. (333 aa)
	CUQ00818.1	Putative transmembrane protein. (156 aa)
	CUQ00837.1	WD40-like Beta Propeller Repeat. (476 aa)
	ttcA	PP-loop domain protein; Belongs to the TtcA family. (249 aa)
	CUQ00929.1	Protein of uncharacterised function%2C DUF486. (67 aa)
	CUQ02830.1	Peroxiredoxin. (249 aa)
	CUQ03252.1	Transposase IS4 family protein. (261 aa)
	CUQ03606.1	Uncharacterised protein. (460 aa)
	CUQ03628.1	Hemin receptor. (553 aa)
	tcyA	ABC transporter substrate-binding protein. (276 aa)
	CUQ03844.1	Uncharacterised protein. (736 aa)
	CUQ03907.1	Uncharacterised protein. (57 aa)
	CUQ03983.1	Tetratricopeptide repeat. (91 aa)
	CUQ04403.1	Sporulation domain-containing protein. (166 aa)
	CUQ04780.1	Putative exported Tpr repeat-family protein. (686 aa)
	CUQ05055.1	Uncharacterised protein. (350 aa)
	ugl_1-2	Glycosyl hydrolase 88. (410 aa)
	lepB_2-2	Signal peptidase I; Belongs to the peptidase S26 family. (311 aa)
	lepB_1	Signal peptidase I; Belongs to the peptidase S26 family. (497 aa)
	CUQ10271.1	Uncharacterised protein. (651 aa)
	CUQ10295.1	Protein of uncharacterised function (DUF3108). (290 aa)
	CUQ10488.1	GH3 auxin-responsive promoter. (503 aa)
	CUQ12216.1	Alkyl hydroperoxide reductase. (383 aa)
	CUQ12690.1	Protein of uncharacterised function (DUF2795). (73 aa)
	CUQ12807.1	Putative transmembrane protein. (186 aa)
	CUQ13523.1	Protein of uncharacterised function (DUF3467). (103 aa)
	CUQ17572.1	Putative transmembrane protein. (372 aa)
	lepB_2	Signal peptidase I; Belongs to the peptidase S26 family. (296 aa)
	nreC_1	Transcriptional regulator. (204 aa)
	CUQ18597.1	Hemerythrin HHE cation binding domain protein. (234 aa)
	mecI	CopY family transcriptional regulator. (127 aa)
	CUQ18637.1	Thioredoxin domain-containing protein. (621 aa)
	CUQ18654.1	Outer membrane transport energization protein TonB. (693 aa)
	dsbE	Alkyl hydroperoxide reductase. (256 aa)
	CUQ19633.1	Uncharacterised protein. (227 aa)
	truA	tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (250 aa)
	CUQ19702.1	Putative transmembrane protein. (299 aa)
	CUQ19758.1	Protein of uncharacterised function (DUF3256). (219 aa)
	CUQ20275.1	Uncharacterised protein. (527 aa)
	CUQ21907.1	NigD-like protein. (234 aa)
	rpoE_7	RNA polymerase%2C sigma-24 subunit%2C ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily. (182 aa)
	CUQ21946.1	RNA polymerase ECF-type sigma factor. (437 aa)
	CUQ24361.1	Fucokinase. (987 aa)
	CUQ25277.1	L-fucose isomerase and related proteins. (411 aa)
	lolE_2	Putative transmembrane permease. (414 aa)
	CUQ27545.1	Uncharacterised protein. (150 aa)
	CUQ28086.1	NigD-like protein. (249 aa)
	CUQ29869.1	Lipoprotein. (635 aa)

Your Current Organism:

Bacteroides uniformis

NCBI taxonomy Id: 820
Other names: ATCC 8492, B. uniformis, CCUG 4942, CIP 103695, DSM 6597, JCM 5828, NCTC 13054

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUP26657.1	CUP27266.1	ERS852554_00156	ERS852554_00176	Family of uncharacterised function (DUF490).	Tetratricopeptide repeat.	0.616
CUP26657.1	CUP27696.1	ERS852554_00156	ERS852554_00191	Family of uncharacterised function (DUF490).	Uncharacterised protein.	0.418
CUP26657.1	CUP36080.1	ERS852554_00156	ERS852554_00475	Family of uncharacterised function (DUF490).	Surface antigen (D15).	0.772
CUP26657.1	CUP36172.1	ERS852554_00156	ERS852554_00478	Family of uncharacterised function (DUF490).	Putative lipoprotein.	0.722
CUP26657.1	CUP38584.1	ERS852554_00156	ERS852554_00556	Family of uncharacterised function (DUF490).	Protein of uncharacterised function (DUF3078).	0.740
CUP26657.1	CUP43013.1	ERS852554_00156	ERS852554_00705	Family of uncharacterised function (DUF490).	Peptidoglycan-binding lysin domain protein.	0.505
CUP26657.1	CUP43047.1	ERS852554_00156	ERS852554_00706	Family of uncharacterised function (DUF490).	Uncharacterised protein.	0.444
CUP26657.1	CUP43072.1	ERS852554_00156	ERS852554_00707	Family of uncharacterised function (DUF490).	Uncharacterised protein.	0.404
CUP26657.1	CUP53840.1	ERS852554_00156	ERS852554_00953	Family of uncharacterised function (DUF490).	Septum formation initiator.	0.460
CUP26657.1	CUP54121.1	ERS852554_00156	ERS852554_00960	Family of uncharacterised function (DUF490).	Permease YjgP/YjgQ family protein.	0.433
CUP26657.1	CUP61093.1	ERS852554_00156	ERS852554_01206	Family of uncharacterised function (DUF490).	Polyketide cyclase / dehydrase and lipid transport.	0.590
CUP26657.1	CUP61304.1	ERS852554_00156	ERS852554_01211	Family of uncharacterised function (DUF490).	Uncharacterised protein.	0.696
CUP26657.1	CUP62767.1	ERS852554_00156	ERS852554_01260	Family of uncharacterised function (DUF490).	Uncharacterised protein.	0.659
CUP26657.1	CUP64216.1	ERS852554_00156	ERS852554_01313	Family of uncharacterised function (DUF490).	Protein of uncharacterised function (DUF3316).	0.515
CUP26657.1	CUP65609.1	ERS852554_00156	ERS852554_01365	Family of uncharacterised function (DUF490).	Cell division protein FtsQ.	0.759
CUP26657.1	CUP67040.1	ERS852554_00156	ERS852554_01418	Family of uncharacterised function (DUF490).	Putative transmembrane protein.	0.490
CUP26657.1	CUP68060.1	ERS852554_00156	ERS852554_01452	Family of uncharacterised function (DUF490).	Putative TPR-repeat protein.	0.656
CUP26657.1	CUP68088.1	ERS852554_00156	ERS852554_01453	Family of uncharacterised function (DUF490).	TonB-dependent receptor.	0.708
CUP26657.1	CUP69317.1	ERS852554_00156	ERS852554_01506	Family of uncharacterised function (DUF490).	Tetratricopeptide repeat.	0.511
CUP26657.1	CUP69346.1	ERS852554_00156	ERS852554_01507	Family of uncharacterised function (DUF490).	Alkyl hydroperoxide reductase.	0.566