(8 nodes) ABC3 transporter permease protein domain, and Putative auto-transporter adhesin, head GIN domain network (Bacteroides uniformis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	lolD_3	ABC transporter related protein. (221 aa)
	macB_12	Putative ABC transporter permease component. (424 aa)
	CUQ25156.1	Putative ABC transporter ABC permease. (419 aa)
	CUQ25172.1	Protein of uncharacterised function (DUF2807). (207 aa)
	macB_13	Putative ABC transporter permease component. (432 aa)
	CUQ25207.1	ABC transporter permease. (412 aa)
	macB_14	Putative ABC transporter permease component. (410 aa)
	macB_15	ABC transporter permease. (415 aa)

Your Current Organism:

Bacteroides uniformis

NCBI taxonomy Id: 820
Other names: ATCC 8492, B. uniformis, CCUG 4942, CIP 103695, DSM 6597, JCM 5828, NCTC 13054

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUQ25156.1	CUQ25172.1	ERS852554_03634	ERS852554_03635	Putative ABC transporter ABC permease.	Protein of uncharacterised function (DUF2807).	0.833
CUQ25156.1	CUQ25207.1	ERS852554_03634	ERS852554_03637	Putative ABC transporter ABC permease.	ABC transporter permease.	0.624
CUQ25156.1	lolD_3	ERS852554_03634	ERS852554_03632	Putative ABC transporter ABC permease.	ABC transporter related protein.	0.892
CUQ25156.1	macB_12	ERS852554_03634	ERS852554_03633	Putative ABC transporter ABC permease.	Putative ABC transporter permease component.	0.877
CUQ25156.1	macB_13	ERS852554_03634	ERS852554_03636	Putative ABC transporter ABC permease.	Putative ABC transporter permease component.	0.856
CUQ25156.1	macB_14	ERS852554_03634	ERS852554_03638	Putative ABC transporter ABC permease.	Putative ABC transporter permease component.	0.735
CUQ25156.1	macB_15	ERS852554_03634	ERS852554_03639	Putative ABC transporter ABC permease.	ABC transporter permease.	0.511
CUQ25172.1	CUQ25156.1	ERS852554_03635	ERS852554_03634	Protein of uncharacterised function (DUF2807).	Putative ABC transporter ABC permease.	0.833
CUQ25172.1	CUQ25207.1	ERS852554_03635	ERS852554_03637	Protein of uncharacterised function (DUF2807).	ABC transporter permease.	0.829
CUQ25172.1	lolD_3	ERS852554_03635	ERS852554_03632	Protein of uncharacterised function (DUF2807).	ABC transporter related protein.	0.735
CUQ25172.1	macB_12	ERS852554_03635	ERS852554_03633	Protein of uncharacterised function (DUF2807).	Putative ABC transporter permease component.	0.694
CUQ25172.1	macB_13	ERS852554_03635	ERS852554_03636	Protein of uncharacterised function (DUF2807).	Putative ABC transporter permease component.	0.702
CUQ25172.1	macB_14	ERS852554_03635	ERS852554_03638	Protein of uncharacterised function (DUF2807).	Putative ABC transporter permease component.	0.575
CUQ25172.1	macB_15	ERS852554_03635	ERS852554_03639	Protein of uncharacterised function (DUF2807).	ABC transporter permease.	0.606
CUQ25207.1	CUQ25156.1	ERS852554_03637	ERS852554_03634	ABC transporter permease.	Putative ABC transporter ABC permease.	0.624
CUQ25207.1	CUQ25172.1	ERS852554_03637	ERS852554_03635	ABC transporter permease.	Protein of uncharacterised function (DUF2807).	0.829
CUQ25207.1	lolD_3	ERS852554_03637	ERS852554_03632	ABC transporter permease.	ABC transporter related protein.	0.811
CUQ25207.1	macB_12	ERS852554_03637	ERS852554_03633	ABC transporter permease.	Putative ABC transporter permease component.	0.733
CUQ25207.1	macB_13	ERS852554_03637	ERS852554_03636	ABC transporter permease.	Putative ABC transporter permease component.	0.923
CUQ25207.1	macB_14	ERS852554_03637	ERS852554_03638	ABC transporter permease.	Putative ABC transporter permease component.	0.903