STRINGSTRING
oprM_4 oprM_4 oprM_5 oprM_5 bepF_2 bepF_2 acrD acrD oprM_6 oprM_6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
oprM_4Outer membrane efflux protein. (442 aa)
oprM_5Multidrug resistance protein. (468 aa)
bepF_2Putative acriflavine resistance protein E precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (424 aa)
acrDPutative aminoglycoside efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1036 aa)
oprM_6Putative puter membrane protein. (458 aa)
Your Current Organism:
Bacteroides uniformis
NCBI taxonomy Id: 820
Other names: ATCC 8492, B. uniformis, CCUG 4942, CIP 103695, DSM 6597, JCM 5828, NCTC 13054
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