STRINGSTRING
eptA eptA oprM_2 oprM_2 oprM_3 oprM_3 oprM_4 oprM_4 tycC tycC mdtE_1 mdtE_1 amiA amiA CUP87340.1 CUP87340.1 bepF_2 bepF_2 acrD acrD lpxA_1 lpxA_1 mdtE_2 mdtE_2 ttgC ttgC bepF_3 bepF_3 lpxA_2 lpxA_2 degQ degQ mdtC_2 mdtC_2 mdtE_4 mdtE_4
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
eptASulfatase. (566 aa)
oprM_2Outer membrane efflux protein. (466 aa)
oprM_3Outer membrane efflux protein. (452 aa)
oprM_4Outer membrane efflux protein. (442 aa)
tycCAMP-dependent synthetase/ligase. (502 aa)
mdtE_1RND family efflux transporter%2C MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (389 aa)
amiACell wall hydrolase/autolysin. (411 aa)
CUP87340.1Cell wall hydrolase/autolysin. (337 aa)
bepF_2Putative acriflavine resistance protein E precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (424 aa)
acrDPutative aminoglycoside efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1036 aa)
lpxA_1acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase. (255 aa)
mdtE_2Efflux transporter%2C RND family%2C MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (391 aa)
ttgCOuter membrane efflux protein. (450 aa)
bepF_3Multidrug efflux protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (365 aa)
lpxA_2acyl-ACP-UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (258 aa)
degQProtease Do. (509 aa)
mdtC_2Putative AcrB/AcrD/AcrF family efflux transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1010 aa)
mdtE_4Putative HlyD-family efflux transporter component; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (360 aa)
Your Current Organism:
Bacteroides uniformis
NCBI taxonomy Id: 820
Other names: ATCC 8492, B. uniformis, CCUG 4942, CIP 103695, DSM 6597, JCM 5828, NCTC 13054
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