Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| nusA | nusG | GCA_000974605_02592 | GCA_000974605_04046 | Unannotated protein; Participates in both transcription termination and antitermination. | Unannotated protein; Participates in transcription elongation, termination and antitermination. | 0.988 |
| nusA | rho | GCA_000974605_02592 | GCA_000974605_00732 | Unannotated protein; Participates in both transcription termination and antitermination. | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.957 |
| nusA | rpoC | GCA_000974605_02592 | GCA_000974605_04163 | Unannotated protein; Participates in both transcription termination and antitermination. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
| nusA | rpoD | GCA_000974605_02592 | GCA_000974605_01003 | Unannotated protein; Participates in both transcription termination and antitermination. | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.899 |
| nusA | rpoZ | GCA_000974605_02592 | GCA_000974605_02175 | Unannotated protein; Participates in both transcription termination and antitermination. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.987 |
| nusG | nusA | GCA_000974605_04046 | GCA_000974605_02592 | Unannotated protein; Participates in transcription elongation, termination and antitermination. | Unannotated protein; Participates in both transcription termination and antitermination. | 0.988 |
| nusG | rho | GCA_000974605_04046 | GCA_000974605_00732 | Unannotated protein; Participates in transcription elongation, termination and antitermination. | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.986 |
| nusG | rpoC | GCA_000974605_04046 | GCA_000974605_04163 | Unannotated protein; Participates in transcription elongation, termination and antitermination. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
| nusG | rpoD | GCA_000974605_04046 | GCA_000974605_01003 | Unannotated protein; Participates in transcription elongation, termination and antitermination. | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.776 |
| nusG | rpoZ | GCA_000974605_04046 | GCA_000974605_02175 | Unannotated protein; Participates in transcription elongation, termination and antitermination. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.873 |
| rho | nusA | GCA_000974605_00732 | GCA_000974605_02592 | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Unannotated protein; Participates in both transcription termination and antitermination. | 0.957 |
| rho | nusG | GCA_000974605_00732 | GCA_000974605_04046 | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Unannotated protein; Participates in transcription elongation, termination and antitermination. | 0.986 |
| rho | rpoC | GCA_000974605_00732 | GCA_000974605_04163 | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.927 |
| rho | rpoD | GCA_000974605_00732 | GCA_000974605_01003 | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.484 |
| rho | rpoZ | GCA_000974605_00732 | GCA_000974605_02175 | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.835 |
| rpoC | nusA | GCA_000974605_04163 | GCA_000974605_02592 | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Unannotated protein; Participates in both transcription termination and antitermination. | 0.996 |
| rpoC | nusG | GCA_000974605_04163 | GCA_000974605_04046 | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Unannotated protein; Participates in transcription elongation, termination and antitermination. | 0.996 |
| rpoC | rho | GCA_000974605_04163 | GCA_000974605_00732 | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Unannotated protein; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.927 |
| rpoC | rpoD | GCA_000974605_04163 | GCA_000974605_01003 | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.992 |
| rpoC | rpoZ | GCA_000974605_04163 | GCA_000974605_02175 | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Unannotated protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.999 |
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