19 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8ELD8	UBIQUITIN_CONJUGAT_2 domain-containing protein. (186 aa)
	Ube2v1.L	UBIQUITIN_CONJUGAT_2 domain-containing protein. (201 aa)
	traf7	Uncharacterized protein. (666 aa)
	A0A1L8F5G8	Uncharacterized protein; Belongs to the ubiquitin-activating E1 family. (707 aa)
	Zfand4.S	Uncharacterized protein. (690 aa)
	Zfand4.L	Uncharacterized protein. (701 aa)
	A0A1L8FTA7	Ubiquitin-like domain-containing protein. (105 aa)
	A0A1L8FYX8	UBIQUITIN_CONJUGAT_2 domain-containing protein. (137 aa)
	birc6	UBIQUITIN_CONJUGAT_2 domain-containing protein. (4833 aa)
	birc6-2	UBIQUITIN_CONJUGAT_2 domain-containing protein. (4827 aa)
	ubl7	Uncharacterized protein. (373 aa)
	ube2n	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
	ubc	Uncharacterized protein. (533 aa)
	A0A1L8HX68	Ubiquitin-like domain-containing protein. (173 aa)
	rps27a	MGC81889 protein. (156 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	ube2g1	Ube2g1-prov protein; Belongs to the ubiquitin-conjugating enzyme family. (170 aa)
	ube2k	Ube2k protein; Belongs to the ubiquitin-conjugating enzyme family. (200 aa)
	traf7-2	Rfwd1-prov protein. (666 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ELD8	A0A1L8F5G8	A0A1L8ELD8	A0A1L8F5G8	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein; Belongs to the ubiquitin-activating E1 family.	0.812
A0A1L8ELD8	A0A1L8FTA7	A0A1L8ELD8	A0A1L8FTA7	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.997
A0A1L8ELD8	A0A1L8FYX8	A0A1L8ELD8	A0A1L8FYX8	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.552
A0A1L8ELD8	A0A1L8HX68	A0A1L8ELD8	A0A1L8HX68	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.997
A0A1L8ELD8	Ube2v1.L	A0A1L8ELD8	A0A1L8ESM5	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.972
A0A1L8ELD8	Zfand4.L	A0A1L8ELD8	A0A1L8FJR0	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.985
A0A1L8ELD8	Zfand4.S	A0A1L8ELD8	A0A1L8FF23	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.985
A0A1L8ELD8	birc6	A0A1L8ELD8	A0A1L8G248	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.988
A0A1L8ELD8	birc6-2	A0A1L8ELD8	A0A1L8G7T6	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.988
A0A1L8ELD8	rps27a	A0A1L8ELD8	Q6GMC1	UBIQUITIN_CONJUGAT_2 domain-containing protein.	MGC81889 protein.	0.998
A0A1L8ELD8	traf7	A0A1L8ELD8	A0A1L8EYF2	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.766
A0A1L8ELD8	traf7-2	A0A1L8ELD8	Q8AVN1	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Rfwd1-prov protein.	0.766
A0A1L8ELD8	ubc	A0A1L8ELD8	A0A1L8HQK4	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.985
A0A1L8ELD8	ubc-2	A0A1L8ELD8	Q7SY79	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubc-prov protein.	0.985
A0A1L8ELD8	ube2g1	A0A1L8ELD8	Q801P5	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ube2g1-prov protein; Belongs to the ubiquitin-conjugating enzyme family.	0.941
A0A1L8ELD8	ube2k	A0A1L8ELD8	Q8AVM8	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ube2k protein; Belongs to the ubiquitin-conjugating enzyme family.	0.982
A0A1L8ELD8	ube2n	A0A1L8ELD8	A0A1L8GYC6	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.992
A0A1L8ELD8	ubl7	A0A1L8ELD8	A0A1L8GTB6	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.917
A0A1L8F5G8	A0A1L8ELD8	A0A1L8F5G8	A0A1L8ELD8	Uncharacterized protein; Belongs to the ubiquitin-activating E1 family.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.812
A0A1L8F5G8	A0A1L8FTA7	A0A1L8F5G8	A0A1L8FTA7	Uncharacterized protein; Belongs to the ubiquitin-activating E1 family.	Ubiquitin-like domain-containing protein.	0.836