(8 nodes) Mixed, incl. Ribosomal protein L46, N-terminal, and Mitochondrial ribosomal protein L27 network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mrpl41	Uncharacterized protein. (135 aa)
	Mrpl43.L	L51_S25_CI-B8 domain-containing protein. (212 aa)
	A0A1L8GAG0	Uncharacterized protein. (255 aa)
	Mrpl23.S	Uncharacterized protein. (128 aa)
	mrpl49	Uncharacterized protein. (165 aa)
	mrpl46-2	MRP-L46 domain-containing protein. (278 aa)
	mrpl30	Ribosomal_L30 domain-containing protein. (162 aa)
	A0A1L8HXI2	Uncharacterized protein. (112 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8GAG0	A0A1L8HXI2	A0A1L8GAG0	A0A1L8HXI2	Uncharacterized protein.	Uncharacterized protein.	0.966
A0A1L8GAG0	Mrpl23.S	A0A1L8GAG0	A0A1L8GD47	Uncharacterized protein.	Uncharacterized protein.	0.996
A0A1L8GAG0	Mrpl43.L	A0A1L8GAG0	A0A1L8FJA9	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.969
A0A1L8GAG0	mrpl30	A0A1L8GAG0	A0A1L8H8R4	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.990
A0A1L8GAG0	mrpl41	A0A1L8GAG0	A0A1L8F0V4	Uncharacterized protein.	Uncharacterized protein.	0.981
A0A1L8GAG0	mrpl46-2	A0A1L8GAG0	A0A1L8H0Y3	Uncharacterized protein.	MRP-L46 domain-containing protein.	0.983
A0A1L8GAG0	mrpl49	A0A1L8GAG0	A0A1L8GJK9	Uncharacterized protein.	Uncharacterized protein.	0.978
A0A1L8HXI2	A0A1L8GAG0	A0A1L8HXI2	A0A1L8GAG0	Uncharacterized protein.	Uncharacterized protein.	0.966
A0A1L8HXI2	Mrpl23.S	A0A1L8HXI2	A0A1L8GD47	Uncharacterized protein.	Uncharacterized protein.	0.977
A0A1L8HXI2	Mrpl43.L	A0A1L8HXI2	A0A1L8FJA9	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.990
A0A1L8HXI2	mrpl30	A0A1L8HXI2	A0A1L8H8R4	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.990
A0A1L8HXI2	mrpl41	A0A1L8HXI2	A0A1L8F0V4	Uncharacterized protein.	Uncharacterized protein.	0.979
A0A1L8HXI2	mrpl46-2	A0A1L8HXI2	A0A1L8H0Y3	Uncharacterized protein.	MRP-L46 domain-containing protein.	0.976
A0A1L8HXI2	mrpl49	A0A1L8HXI2	A0A1L8GJK9	Uncharacterized protein.	Uncharacterized protein.	0.984
Mrpl23.S	A0A1L8GAG0	A0A1L8GD47	A0A1L8GAG0	Uncharacterized protein.	Uncharacterized protein.	0.996
Mrpl23.S	A0A1L8HXI2	A0A1L8GD47	A0A1L8HXI2	Uncharacterized protein.	Uncharacterized protein.	0.977
Mrpl23.S	Mrpl43.L	A0A1L8GD47	A0A1L8FJA9	Uncharacterized protein.	L51_S25_CI-B8 domain-containing protein.	0.972
Mrpl23.S	mrpl30	A0A1L8GD47	A0A1L8H8R4	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.995
Mrpl23.S	mrpl41	A0A1L8GD47	A0A1L8F0V4	Uncharacterized protein.	Uncharacterized protein.	0.992
Mrpl23.S	mrpl46-2	A0A1L8GD47	A0A1L8H0Y3	Uncharacterized protein.	MRP-L46 domain-containing protein.	0.982