24 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ccz1b	Uncharacterized protein. (471 aa)
	A0A1L8EWS5	WD_REPEATS_REGION domain-containing protein. (1368 aa)
	armc5	BTB domain-containing protein. (934 aa)
	Gripap1.S	Uncharacterized protein. (858 aa)
	A0A1L8F2A7	Uncharacterized protein. (201 aa)
	A0A1L8F494	Pep3_Vps18 domain-containing protein. (599 aa)
	Gripap1.L	Uncharacterized protein. (827 aa)
	A0A1L8F5H9	Uncharacterized protein. (256 aa)
	A0A1L8F6P3	Uncharacterized protein. (201 aa)
	Vps39.L	CNH domain-containing protein. (827 aa)
	Vps11.L	Uncharacterized protein. (303 aa)
	mon1a	Uncharacterized protein. (537 aa)
	A0A1L8GRS2	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (838 aa)
	vps33b	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (615 aa)
	A0A1L8H294	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family. (822 aa)
	tgfbrap1	CNH domain-containing protein. (870 aa)
	A0A1L8HBP7	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (836 aa)
	tgfbrap1-2	CNH domain-containing protein. (857 aa)
	A0A1L8HJP0	Uncharacterized protein. (636 aa)
	vps33a	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (610 aa)
	vps33a-2	LOC100158448 protein; Belongs to the STXBP/unc-18/SEC1 family. (601 aa)
	vipas39	MGC85203 protein. (494 aa)
	vps11	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (914 aa)
	rab9a-2	Rab9a-a protein. (201 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EWS5	A0A1L8F494	A0A1L8EWS5	A0A1L8F494	WD_REPEATS_REGION domain-containing protein.	Pep3_Vps18 domain-containing protein.	0.985
A0A1L8EWS5	A0A1L8F5H9	A0A1L8EWS5	A0A1L8F5H9	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.480
A0A1L8EWS5	A0A1L8GRS2	A0A1L8EWS5	A0A1L8GRS2	WD_REPEATS_REGION domain-containing protein.	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.	0.660
A0A1L8EWS5	A0A1L8H294	A0A1L8EWS5	A0A1L8H294	WD_REPEATS_REGION domain-containing protein.	Vacuolar protein sorting-associated protein 41 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport pathways; Belongs to the VPS41 family.	0.660
A0A1L8EWS5	A0A1L8HBP7	A0A1L8EWS5	A0A1L8HBP7	WD_REPEATS_REGION domain-containing protein.	Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.	0.979
A0A1L8EWS5	A0A1L8HJP0	A0A1L8EWS5	A0A1L8HJP0	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.979
A0A1L8EWS5	Gripap1.L	A0A1L8EWS5	A0A1L8F5D3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.491
A0A1L8EWS5	Gripap1.S	A0A1L8EWS5	A0A1L8EZL1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.491
A0A1L8EWS5	Vps11.L	A0A1L8EWS5	A0A1L8FLI7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.979
A0A1L8EWS5	Vps39.L	A0A1L8EWS5	A0A1L8FAY1	WD_REPEATS_REGION domain-containing protein.	CNH domain-containing protein.	0.966
A0A1L8EWS5	ccz1b	A0A1L8EWS5	A0A1L8EQF7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.571
A0A1L8EWS5	mon1a	A0A1L8EWS5	A0A1L8GPB3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.480
A0A1L8EWS5	tgfbrap1	A0A1L8EWS5	A0A1L8H8U1	WD_REPEATS_REGION domain-containing protein.	CNH domain-containing protein.	0.962
A0A1L8EWS5	tgfbrap1-2	A0A1L8EWS5	A0A1L8HGR2	WD_REPEATS_REGION domain-containing protein.	CNH domain-containing protein.	0.962
A0A1L8EWS5	vipas39	A0A1L8EWS5	Q5EAT9	WD_REPEATS_REGION domain-containing protein.	MGC85203 protein.	0.555
A0A1L8EWS5	vps11	A0A1L8EWS5	Q5XGW5	WD_REPEATS_REGION domain-containing protein.	Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.	0.979
A0A1L8EWS5	vps33a	A0A1L8EWS5	A0A1L8HQN1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.963
A0A1L8EWS5	vps33a-2	A0A1L8EWS5	B2GTX7	WD_REPEATS_REGION domain-containing protein.	LOC100158448 protein; Belongs to the STXBP/unc-18/SEC1 family.	0.963
A0A1L8EWS5	vps33b	A0A1L8EWS5	A0A1L8H0T7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.964
A0A1L8F2A7	A0A1L8F494	A0A1L8F2A7	A0A1L8F494	Uncharacterized protein.	Pep3_Vps18 domain-containing protein.	0.917