STRINGSTRING
A2m.S A2m.S mixer mixer Xenf Xenf nodal5 nodal5 vegt vegt Vegt.L Vegt.L bix3-A bix3-A bix1.3 bix1.3 Mixer Mixer nodal5.2 nodal5.2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
A2m.SUncharacterized protein. (1462 aa)
mixerHomeobox domain-containing protein. (365 aa)
XenfUncharacterized protein. (140 aa)
nodal5TGF_BETA_2 domain-containing protein. (384 aa)
vegtUncharacterized protein. (455 aa)
Vegt.LUncharacterized protein. (455 aa)
bix3-AHomeobox protein BIX3. (389 aa)
bix1.3Bix4 protein. (388 aa)
MixerMix-like endodermal regulator. (371 aa)
nodal5.2Xnr5-10. (384 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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