(5 nodes) Polyprenol biosynthetic process network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	pdss1	Uncharacterized protein; Belongs to the FPP/GGPP synthase family. (454 aa)
	nus1	Uncharacterized protein. (287 aa)
	nus1-2	Uncharacterized protein. (371 aa)
	dhdds	Alkyl transferase; Belongs to the UPP synthase family. (332 aa)
	dhdds-2	Alkyl transferase; Belongs to the UPP synthase family. (332 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
dhdds	dhdds-2	A0A1L8HEB6	Q7ZYJ5	Alkyl transferase; Belongs to the UPP synthase family.	Alkyl transferase; Belongs to the UPP synthase family.	0.900
dhdds	nus1	A0A1L8HEB6	A0A1L8G2P1	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.998
dhdds	nus1-2	A0A1L8HEB6	A0A1L8G8Z5	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.998
dhdds	pdss1	A0A1L8HEB6	A0A1L8FQR5	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.953
dhdds-2	dhdds	Q7ZYJ5	A0A1L8HEB6	Alkyl transferase; Belongs to the UPP synthase family.	Alkyl transferase; Belongs to the UPP synthase family.	0.900
dhdds-2	nus1	Q7ZYJ5	A0A1L8G2P1	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.998
dhdds-2	nus1-2	Q7ZYJ5	A0A1L8G8Z5	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein.	0.998
dhdds-2	pdss1	Q7ZYJ5	A0A1L8FQR5	Alkyl transferase; Belongs to the UPP synthase family.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.953
nus1	dhdds	A0A1L8G2P1	A0A1L8HEB6	Uncharacterized protein.	Alkyl transferase; Belongs to the UPP synthase family.	0.998
nus1	dhdds-2	A0A1L8G2P1	Q7ZYJ5	Uncharacterized protein.	Alkyl transferase; Belongs to the UPP synthase family.	0.998
nus1	nus1-2	A0A1L8G2P1	A0A1L8G8Z5	Uncharacterized protein.	Uncharacterized protein.	0.900
nus1	pdss1	A0A1L8G2P1	A0A1L8FQR5	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.942
nus1-2	dhdds	A0A1L8G8Z5	A0A1L8HEB6	Uncharacterized protein.	Alkyl transferase; Belongs to the UPP synthase family.	0.998
nus1-2	dhdds-2	A0A1L8G8Z5	Q7ZYJ5	Uncharacterized protein.	Alkyl transferase; Belongs to the UPP synthase family.	0.998
nus1-2	nus1	A0A1L8G8Z5	A0A1L8G2P1	Uncharacterized protein.	Uncharacterized protein.	0.900
nus1-2	pdss1	A0A1L8G8Z5	A0A1L8FQR5	Uncharacterized protein.	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	0.942
pdss1	dhdds	A0A1L8FQR5	A0A1L8HEB6	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Alkyl transferase; Belongs to the UPP synthase family.	0.953
pdss1	dhdds-2	A0A1L8FQR5	Q7ZYJ5	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Alkyl transferase; Belongs to the UPP synthase family.	0.953
pdss1	nus1	A0A1L8FQR5	A0A1L8G2P1	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.942
pdss1	nus1-2	A0A1L8FQR5	A0A1L8G8Z5	Uncharacterized protein; Belongs to the FPP/GGPP synthase family.	Uncharacterized protein.	0.942