76 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	lrpprc	Uncharacterized protein. (1391 aa)
	A0A1L8ELM6	Uncharacterized protein. (1380 aa)
	nifk	RRM domain-containing protein. (278 aa)
	cdca7	zf-4CXXC_R1 domain-containing protein. (431 aa)
	Plk1.S	Serine/threonine-protein kinase PLK. (598 aa)
	A0A1L8ESZ9	Uncharacterized protein. (1430 aa)
	Brca1.L	Uncharacterized protein. (1582 aa)
	plk1	Serine/threonine-protein kinase PLK. (598 aa)
	A0A1L8F1L3	Structural maintenance of chromosomes protein. (1232 aa)
	A0A1L8F471	Uncharacterized protein. (317 aa)
	hormad1	HORMA domain-containing protein. (387 aa)
	Tex11.L	Uncharacterized protein. (919 aa)
	mlh3	Uncharacterized protein. (1328 aa)
	rad51	DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...] (336 aa)
	add3	Aldolase_II domain-containing protein. (689 aa)
	smc3	Structural maintenance of chromosomes protein. (1209 aa)
	chek1	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (474 aa)
	ccdc155l	EF-hand domain-containing protein. (572 aa)
	A0A1L8FI26	Structural maintenance of chromosomes protein. (1214 aa)
	A0A1L8FIX3	Uncharacterized protein. (95 aa)
	wapl	WAPL domain-containing protein. (1178 aa)
	chek1-2	Protein kinase domain-containing protein. (510 aa)
	urpta-1	Uncharacterized protein. (139 aa)
	ccdc155l-2	EF-hand domain-containing protein. (346 aa)
	Rrs1.S	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (344 aa)
	ncapg2	Uncharacterized protein. (1156 aa)
	topbp1	Uncharacterized protein. (1573 aa)
	Sycp2l.L	Uncharacterized protein. (895 aa)
	Rad21.L	Uncharacterized protein. (629 aa)
	A0A1L8G1A7	Uncharacterized protein. (1134 aa)
	Smc4.L	Structural maintenance of chromosomes protein. (1299 aa)
	kifap3	Uncharacterized protein. (793 aa)
	Sun2.S	SUN domain-containing protein. (678 aa)
	sycp3	Cor1 domain-containing protein. (237 aa)
	Msh4.L	DNA_MISMATCH_REPAIR_2 domain-containing protein. (833 aa)
	Kifap3.L	Uncharacterized protein. (794 aa)
	sun2	SUN domain-containing protein. (709 aa)
	dmc1	Uncharacterized protein; Belongs to the RecA family. (341 aa)
	A0A1L8GPY4	Uncharacterized protein. (621 aa)
	Ncaph.S	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. (700 aa)
	blm	Uncharacterized protein. (1368 aa)
	ncaph2	Uncharacterized protein. (620 aa)
	rad50	Zinc-hook domain-containing protein. (1311 aa)
	rad50-2	Zinc-hook domain-containing protein. (1312 aa)
	Ncaph2.L	Uncharacterized protein. (624 aa)
	A0A1L8H1D5	Uncharacterized protein. (1367 aa)
	A0A1L8H1M8	Uncharacterized protein. (638 aa)
	syce2	Uncharacterized protein. (185 aa)
	rcc1	Uncharacterized protein. (426 aa)
	A0A1L8HE05	Uncharacterized protein. (914 aa)
	brca2	Tower domain-containing protein. (3177 aa)
	Rsph1.L	Uncharacterized protein. (338 aa)
	A0A1L8HKT9	RING-type domain-containing protein. (297 aa)
	Rnf212b.S	Uncharacterized protein. (244 aa)
	Ncapg.L	Cnd3 domain-containing protein. (1035 aa)
	smc2	Structural maintenance of chromosomes protein. (1202 aa)
	A0A1L8HXA1	Uncharacterized protein. (1469 aa)
	rnf212b	RING-type domain-containing protein. (302 aa)
	rec8	Uncharacterized protein. (584 aa)
	ccnb1ip1	RING-type domain-containing protein. (271 aa)
	rad9b	Cell cycle checkpoint control protein; Belongs to the rad9 family. (483 aa)
	rad1	Uncharacterized protein. (283 aa)
	Nol6.L	Nucleolar protein 6. (1135 aa)
	Smc1ab	SMC hinge domain-containing protein. (1151 aa)
	mlh1	DNA mismatch repair protein MutL-homolog 1. (750 aa)
	rcc1-2	Chc1-a protein. (420 aa)
	cdx2	MGC130987 protein. (256 aa)
	cdx2-2	Homeobox domain-containing protein. (254 aa)
	add3-2	LOC432146 protein. (687 aa)
	rad21	LOC503676 protein. (629 aa)
	fkbp6	Peptidylprolyl isomerase. (304 aa)
	rrs1	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (342 aa)
	rad9a	Cell cycle checkpoint control protein; Belongs to the rad9 family. (377 aa)
	Hus1	Checkpoint protein; Belongs to the HUS1 family. (282 aa)
	Nek2	Nek2A. (442 aa)
	smc1b	Structural maintenance of chromosomes protein. (1228 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ELM6	A0A1L8FIX3	A0A1L8ELM6	A0A1L8FIX3	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A1L8ELM6	A0A1L8HE05	A0A1L8ELM6	A0A1L8HE05	Uncharacterized protein.	Uncharacterized protein.	0.475
A0A1L8ELM6	A0A1L8HXA1	A0A1L8ELM6	A0A1L8HXA1	Uncharacterized protein.	Uncharacterized protein.	0.411
A0A1L8ELM6	Tex11.L	A0A1L8ELM6	A0A1L8F718	Uncharacterized protein.	Uncharacterized protein.	0.400
A0A1L8ELM6	syce2	A0A1L8ELM6	A0A1L8H2Z8	Uncharacterized protein.	Uncharacterized protein.	0.451
A0A1L8ELM6	sycp3	A0A1L8ELM6	A0A1L8GIK4	Uncharacterized protein.	Cor1 domain-containing protein.	0.597
A0A1L8ELM6	urpta-1	A0A1L8ELM6	A0A1L8FLU4	Uncharacterized protein.	Uncharacterized protein.	0.449
A0A1L8ESZ9	A0A1L8FIX3	A0A1L8ESZ9	A0A1L8FIX3	Uncharacterized protein.	Uncharacterized protein.	0.439
A0A1L8ESZ9	A0A1L8HE05	A0A1L8ESZ9	A0A1L8HE05	Uncharacterized protein.	Uncharacterized protein.	0.475
A0A1L8ESZ9	A0A1L8HXA1	A0A1L8ESZ9	A0A1L8HXA1	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A1L8ESZ9	Tex11.L	A0A1L8ESZ9	A0A1L8F718	Uncharacterized protein.	Uncharacterized protein.	0.400
A0A1L8ESZ9	syce2	A0A1L8ESZ9	A0A1L8H2Z8	Uncharacterized protein.	Uncharacterized protein.	0.451
A0A1L8ESZ9	sycp3	A0A1L8ESZ9	A0A1L8GIK4	Uncharacterized protein.	Cor1 domain-containing protein.	0.597
A0A1L8ESZ9	urpta-1	A0A1L8ESZ9	A0A1L8FLU4	Uncharacterized protein.	Uncharacterized protein.	0.449
A0A1L8F1L3	A0A1L8FI26	A0A1L8F1L3	A0A1L8FI26	Structural maintenance of chromosomes protein.	Structural maintenance of chromosomes protein.	0.978
A0A1L8F1L3	A0A1L8H1M8	A0A1L8F1L3	A0A1L8H1M8	Structural maintenance of chromosomes protein.	Uncharacterized protein.	0.873
A0A1L8F1L3	Brca1.L	A0A1L8F1L3	A0A1L8ETS4	Structural maintenance of chromosomes protein.	Uncharacterized protein.	0.538
A0A1L8F1L3	Msh4.L	A0A1L8F1L3	A0A1L8GLU0	Structural maintenance of chromosomes protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.428
A0A1L8F1L3	Ncapg.L	A0A1L8F1L3	A0A1L8HTE1	Structural maintenance of chromosomes protein.	Cnd3 domain-containing protein.	0.949
A0A1L8F1L3	Ncaph.S	A0A1L8F1L3	A0A1L8GS01	Structural maintenance of chromosomes protein.	Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.	0.873