59 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8FYS5	GATA-type domain-containing protein. (466 aa)
	A0A1L8EMB1	Uncharacterized protein. (683 aa)
	itgb5	Integrin beta; Belongs to the integrin beta chain family. (808 aa)
	Itga4.S	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1073 aa)
	Fn1.S	Uncharacterized protein. (2480 aa)
	Mmp9.L	Uncharacterized protein. (674 aa)
	A0A1L8EU06	Uncharacterized protein. (574 aa)
	Itgb5.L	Integrin beta; Belongs to the integrin beta chain family. (808 aa)
	itga4	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1027 aa)
	A0A1L8EWN9	Uncharacterized protein. (2484 aa)
	Itgav.L	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1080 aa)
	paf1	Uncharacterized protein. (524 aa)
	rtf1	Plus3 domain-containing protein. (677 aa)
	Dusp5.S	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (382 aa)
	dusp5	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (384 aa)
	dkk1	Dickkopf_N domain-containing protein. (263 aa)
	Setd2.S	Uncharacterized protein. (2779 aa)
	Eomes.S	T-box_assoc domain-containing protein. (668 aa)
	inhba	TGF_BETA_2 domain-containing protein. (411 aa)
	gata6	Uncharacterized protein. (502 aa)
	Setd2.L	Uncharacterized protein. (2860 aa)
	inhba-2	TGF_BETA_2 domain-containing protein. (411 aa)
	dusp4	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (406 aa)
	A0A1L8G151	Homeobox domain-containing protein. (360 aa)
	Bix1.2.S	Homeobox domain-containing protein. (399 aa)
	A0A1L8G3D5	NR LBD domain-containing protein. (268 aa)
	sox7	Uncharacterized protein. (363 aa)
	sox7-2	Uncharacterized protein. (362 aa)
	ctr9	TPR_REGION domain-containing protein. (1157 aa)
	mmp15	ZnMc domain-containing protein. (650 aa)
	Ctr9.L	TPR_REGION domain-containing protein. (1082 aa)
	A0A1L8GLH0	ZnMc domain-containing protein. (652 aa)
	cdc73	Uncharacterized protein. (531 aa)
	Leo1.S	Uncharacterized protein. (782 aa)
	dusp1	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (369 aa)
	dusp1-2	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (369 aa)
	A0A1L8H0G4	Uncharacterized protein. (716 aa)
	nr0b1	NR LBD domain-containing protein. (280 aa)
	lamb3	Uncharacterized protein. (1157 aa)
	itga5	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1049 aa)
	col8a1-2	C1q domain-containing protein. (731 aa)
	A0A1L8HD77	SMB domain-containing protein. (356 aa)
	nr0b1-2	NR LBD domain-containing protein. (280 aa)
	A0A1L8HDW1	Uncharacterized protein. (808 aa)
	Itga5.L	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1050 aa)
	Dusp4.S	Dual specificity protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily. (385 aa)
	A0A1L8HPJ2	ZnMc domain-containing protein. (581 aa)
	mmp14	Membrane type-1 matrix metalloproteinase 14. (575 aa)
	ctnnb1	Beta-catenin protein. (781 aa)
	hmga2-2	MGC81571 protein. (105 aa)
	hnf1b	MGC68543 protein. (561 aa)
	hnf1b-2	Tcf2 protein. (561 aa)
	ctnnb1-2	Ctnnb1-prov protein. (781 aa)
	cdc73-2	MGC53995 protein. (531 aa)
	mmp9	Gelatinase B. (671 aa)
	dkk1-2	Dickkopf homolog 1. (259 aa)
	hmga2	LOC100158391 protein. (105 aa)
	nog	Noggin; Belongs to the noggin family. (222 aa)
	LOC398065	LOC398065 protein. (666 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EU06	A0A1L8HPJ2	A0A1L8EU06	A0A1L8HPJ2	Uncharacterized protein.	ZnMc domain-containing protein.	0.424
A0A1L8EU06	mmp14	A0A1L8EU06	Q5USC3	Uncharacterized protein.	Membrane type-1 matrix metalloproteinase 14.	0.423
A0A1L8EWN9	A0A1L8HD77	A0A1L8EWN9	A0A1L8HD77	Uncharacterized protein.	SMB domain-containing protein.	0.585
A0A1L8FYS5	sox7	A0A1L8FYS5	A0A1L8G5T0	GATA-type domain-containing protein.	Uncharacterized protein.	0.485
A0A1L8FYS5	sox7-2	A0A1L8FYS5	A0A1L8GC14	GATA-type domain-containing protein.	Uncharacterized protein.	0.485
A0A1L8GLH0	A0A1L8HPJ2	A0A1L8GLH0	A0A1L8HPJ2	ZnMc domain-containing protein.	ZnMc domain-containing protein.	0.464
A0A1L8GLH0	mmp14	A0A1L8GLH0	Q5USC3	ZnMc domain-containing protein.	Membrane type-1 matrix metalloproteinase 14.	0.463
A0A1L8H0G4	Ctr9.L	A0A1L8H0G4	A0A1L8GIG6	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.997
A0A1L8H0G4	Setd2.L	A0A1L8H0G4	A0A1L8FUU2	Uncharacterized protein.	Uncharacterized protein.	0.641
A0A1L8H0G4	Setd2.S	A0A1L8H0G4	A0A1L8FQE1	Uncharacterized protein.	Uncharacterized protein.	0.641
A0A1L8H0G4	cdc73	A0A1L8H0G4	A0A1L8GND2	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1L8H0G4	cdc73-2	A0A1L8H0G4	Q7ZY58	Uncharacterized protein.	MGC53995 protein.	0.999
A0A1L8H0G4	ctnnb1	A0A1L8H0G4	Q63ZT4	Uncharacterized protein.	Beta-catenin protein.	0.739
A0A1L8H0G4	ctnnb1-2	A0A1L8H0G4	Q7ZX35	Uncharacterized protein.	Ctnnb1-prov protein.	0.739
A0A1L8H0G4	ctr9	A0A1L8H0G4	A0A1L8GDS4	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.997
A0A1L8H0G4	paf1	A0A1L8H0G4	A0A1L8F956	Uncharacterized protein.	Uncharacterized protein.	0.999
A0A1L8H0G4	rtf1	A0A1L8H0G4	A0A1L8FB46	Uncharacterized protein.	Plus3 domain-containing protein.	0.998
A0A1L8HD77	A0A1L8EWN9	A0A1L8HD77	A0A1L8EWN9	SMB domain-containing protein.	Uncharacterized protein.	0.585
A0A1L8HD77	Fn1.S	A0A1L8HD77	A0A1L8EPN8	SMB domain-containing protein.	Uncharacterized protein.	0.585
A0A1L8HD77	Itga4.S	A0A1L8HD77	A0A1L8EPE4	SMB domain-containing protein.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.484