53 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8EZP3	Uncharacterized protein. (890 aa)
	daam1	Uncharacterized protein. (1077 aa)
	Actn4.S	Uncharacterized protein. (904 aa)
	shroom4	Uncharacterized protein. (1717 aa)
	A0A1L8F929	Uncharacterized protein. (899 aa)
	A0A1L8FAA5	Uncharacterized protein. (1077 aa)
	Actn1.L	Uncharacterized protein. (890 aa)
	A0A1L8FDP3	Uncharacterized protein. (694 aa)
	A0A1L8FDQ1	Uncharacterized protein. (597 aa)
	bag3	Uncharacterized protein. (527 aa)
	fblim1	Uncharacterized protein. (388 aa)
	A0A1L8FI59	Uncharacterized protein. (558 aa)
	Pdlim1.L	Uncharacterized protein. (325 aa)
	A0A1L8FK73	Uncharacterized protein. (634 aa)
	fblim1-2	Uncharacterized protein. (386 aa)
	A0A1L8FSU2	Uncharacterized protein. (172 aa)
	A0A1L8G0W2	Uncharacterized protein. (1082 aa)
	A0A1L8G3P7	LIM zinc-binding domain-containing protein. (59 aa)
	A0A1L8G3V3	LIM zinc-binding domain-containing protein. (82 aa)
	A0A1L8G3V9	Uncharacterized protein. (46 aa)
	A0A1L8G6Q8	Uncharacterized protein. (1078 aa)
	lpp	Uncharacterized protein. (628 aa)
	A0A1L8GFH0	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (946 aa)
	A0A1L8GHC7	Uncharacterized protein. (1368 aa)
	A0A1L8GM33	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily. (944 aa)
	A0A1L8GP86	Uncharacterized protein. (1303 aa)
	A0A1L8GRD7	Uncharacterized protein. (954 aa)
	Pdlim7.L	Uncharacterized protein. (421 aa)
	A0A1L8GV78	Uncharacterized protein. (831 aa)
	A0A1L8GVB1	Uncharacterized protein. (332 aa)
	A0A1L8GWS7	Uncharacterized protein. (949 aa)
	Pdlim4.L	PDZ domain-containing protein. (265 aa)
	A0A1L8GXR8	Uncharacterized protein. (664 aa)
	pdlim7	Uncharacterized protein. (421 aa)
	lima1	LIM zinc-binding domain-containing protein. (713 aa)
	fhl3	Uncharacterized protein. (279 aa)
	Lima1.L	LIM zinc-binding domain-containing protein. (708 aa)
	limch1	Uncharacterized protein. (1885 aa)
	A0A1L8HLC8	PDZ domain-containing protein. (173 aa)
	A0A1L8HLD2	LIM zinc-binding domain-containing protein. (259 aa)
	A0A1L8HMA6	Uncharacterized protein. (583 aa)
	A0A1L8HP64	Uncharacterized protein; Belongs to the phosphohexose mutase family. (566 aa)
	limch1-2	Uncharacterized protein. (1911 aa)
	pdlim3	Uncharacterized protein. (358 aa)
	A0A1L8HVF6	Uncharacterized protein. (889 aa)
	A0A1L8HYJ6	Uncharacterized protein; Belongs to the phosphohexose mutase family. (566 aa)
	MGC81583	MGC81583 protein. (172 aa)
	MGC80982	Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (295 aa)
	fhl3-2	MGC80605 protein. (279 aa)
	CNN2	Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (294 aa)
	bag3-2	Bag3-A protein. (597 aa)
	pdlim1	MGC53685 protein. (325 aa)
	myl12b	Cytoplasmic myosin II regulatory light chain. (172 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EZP3	A0A1L8HMA6	A0A1L8EZP3	A0A1L8HMA6	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A1L8EZP3	A0A1L8HVF6	A0A1L8EZP3	A0A1L8HVF6	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A1L8EZP3	Pdlim1.L	A0A1L8EZP3	A0A1L8FJS9	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A1L8EZP3	Pdlim7.L	A0A1L8EZP3	A0A1L8GV01	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A1L8EZP3	pdlim1	A0A1L8EZP3	Q7ZYS4	Uncharacterized protein.	MGC53685 protein.	0.502
A0A1L8EZP3	pdlim7	A0A1L8EZP3	A0A1L8GXV3	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A1L8F929	A0A1L8HMA6	A0A1L8F929	A0A1L8HMA6	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A1L8F929	A0A1L8HVF6	A0A1L8F929	A0A1L8HVF6	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A1L8F929	Pdlim1.L	A0A1L8F929	A0A1L8FJS9	Uncharacterized protein.	Uncharacterized protein.	0.502
A0A1L8F929	Pdlim7.L	A0A1L8F929	A0A1L8GV01	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A1L8F929	pdlim1	A0A1L8F929	Q7ZYS4	Uncharacterized protein.	MGC53685 protein.	0.502
A0A1L8F929	pdlim7	A0A1L8F929	A0A1L8GXV3	Uncharacterized protein.	Uncharacterized protein.	0.465
A0A1L8FDP3	CNN2	A0A1L8FDP3	Q7ZX19	Uncharacterized protein.	Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity.	0.447
A0A1L8FDP3	MGC80982	A0A1L8FDP3	Q6GNN7	Uncharacterized protein.	Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity.	0.447
A0A1L8G3P7	A0A1L8G3V3	A0A1L8G3P7	A0A1L8G3V3	LIM zinc-binding domain-containing protein.	LIM zinc-binding domain-containing protein.	0.422
A0A1L8G3V3	A0A1L8G3P7	A0A1L8G3V3	A0A1L8G3P7	LIM zinc-binding domain-containing protein.	LIM zinc-binding domain-containing protein.	0.422
A0A1L8GHC7	A0A1L8GP86	A0A1L8GHC7	A0A1L8GP86	Uncharacterized protein.	Uncharacterized protein.	0.698
A0A1L8GHC7	A0A1L8GRD7	A0A1L8GHC7	A0A1L8GRD7	Uncharacterized protein.	Uncharacterized protein.	0.551
A0A1L8GHC7	A0A1L8GWS7	A0A1L8GHC7	A0A1L8GWS7	Uncharacterized protein.	Uncharacterized protein.	0.551
A0A1L8GP86	A0A1L8GHC7	A0A1L8GP86	A0A1L8GHC7	Uncharacterized protein.	Uncharacterized protein.	0.698