71 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8HPF0	Uncharacterized protein. (629 aa)
	Syk.S	Tyrosine-protein kinase. (632 aa)
	rasa1	Uncharacterized protein. (944 aa)
	A0A1L8HT36	PH domain-containing protein. (582 aa)
	A0A1L8HVK5	Uncharacterized protein. (280 aa)
	shd	SH2 domain-containing protein. (371 aa)
	A0A1L8HWT4	Uncharacterized protein. (717 aa)
	shb	SH2 domain-containing protein. (485 aa)
	syk	Tyrosine-protein kinase. (605 aa)
	A0A1L8HZ53	Uncharacterized protein. (628 aa)
	A0A1L8I158	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (608 aa)
	Rasa1.L	Uncharacterized protein. (939 aa)
	Sh2d3c.L	Uncharacterized protein. (656 aa)
	PIK3R1	Phosphoinositide-3-kinase. (722 aa)
	ptpn6-2	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (587 aa)
	pik3r3	MGC84470 protein. (461 aa)
	crkl	MGC84382 protein. (302 aa)
	zap70	Tyrosine-protein kinase. (617 aa)
	pik3r2	Pik3r2-prov protein. (457 aa)
	ptpn11b	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (594 aa)
	ptpn3	Tyrosine-protein phosphatase; Belongs to the protein-tyrosine phosphatase family. Non- receptor class subfamily. (920 aa)
	pik3r1	MGC80357 protein. (722 aa)
	crkl-2	MGC81407 protein. (302 aa)
	socs3	MGC81248 protein. (199 aa)
	Ptpn11.S	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (595 aa)
	Cbl.S	Uncharacterized protein. (945 aa)
	A0A1L8ELJ8	Uncharacterized protein. (671 aa)
	Socs3.S	Uncharacterized protein. (250 aa)
	grb2	Uncharacterized protein. (229 aa)
	grap	Uncharacterized protein. (219 aa)
	hck	Tyrosine-protein kinase. (496 aa)
	A0A1L8ET00	Uncharacterized protein. (694 aa)
	grb2-2	Uncharacterized protein. (229 aa)
	grap-2	Uncharacterized protein. (219 aa)
	abl1	Tyrosine-protein kinase. (1122 aa)
	Sh2d3c.S	Uncharacterized protein. (875 aa)
	shc1	Uncharacterized protein. (605 aa)
	she	SH2 domain-containing protein. (435 aa)
	Shc1.L	Uncharacterized protein. (601 aa)
	ptpn6	Uncharacterized protein. (687 aa)
	A0A1L8FG16	Uncharacterized protein. (559 aa)
	A0A1L8FGY8	Uncharacterized protein. (493 aa)
	socs3l	Uncharacterized protein. (215 aa)
	cbl	Uncharacterized protein. (887 aa)
	A0A1L8FN82	Uncharacterized protein. (507 aa)
	A0A1L8FND6	Uncharacterized protein. (232 aa)
	A0A1L8GE12	Uncharacterized protein. (484 aa)
	abl2	Tyrosine-protein kinase. (1102 aa)
	bcar3	Uncharacterized protein. (808 aa)
	grap2	Uncharacterized protein. (303 aa)
	A0A1L8GHM7	PID domain-containing protein. (309 aa)
	A0A1L8GI49	Uncharacterized protein. (452 aa)
	Abl2.L	Tyrosine-protein kinase. (1102 aa)
	Bcar3.L	Uncharacterized protein. (808 aa)
	grap2-2	Uncharacterized protein. (301 aa)
	shf	SH2 domain-containing protein. (534 aa)
	shf-2	SH2 domain-containing protein. (541 aa)
	Samsn1.S	Uncharacterized protein. (303 aa)
	crk	Uncharacterized protein. (297 aa)
	lck	Tyrosine-protein kinase. (503 aa)
	ldlrap1	PID domain-containing protein. (309 aa)
	Cblb.S	Uncharacterized protein. (979 aa)
	nck2	Cytoplasmic protein. (381 aa)
	Crk.L	Uncharacterized protein. (297 aa)
	Lck.L	Tyrosine-protein kinase. (502 aa)
	Ldlrap1.S	PID domain-containing protein. (309 aa)
	Cblb.L	Uncharacterized protein. (978 aa)
	nck2-2	Cytoplasmic protein. (381 aa)
	Sh3bp2.S	PH domain-containing protein. (593 aa)
	A0A1L8HNH2	Tyrosine-protein kinase. (608 aa)
	A0A1L8HNI8	Uncharacterized protein. (721 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8FG16	A0A1L8FGY8	A0A1L8FG16	A0A1L8FGY8	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A1L8FG16	A0A1L8FN82	A0A1L8FG16	A0A1L8FN82	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A1L8FG16	A0A1L8HNH2	A0A1L8FG16	A0A1L8HNH2	Uncharacterized protein.	Tyrosine-protein kinase.	0.537
A0A1L8FG16	A0A1L8HNI8	A0A1L8FG16	A0A1L8HNI8	Uncharacterized protein.	Uncharacterized protein.	0.555
A0A1L8FG16	A0A1L8HPF0	A0A1L8FG16	A0A1L8HPF0	Uncharacterized protein.	Uncharacterized protein.	0.566
A0A1L8FG16	A0A1L8HWT4	A0A1L8FG16	A0A1L8HWT4	Uncharacterized protein.	Uncharacterized protein.	0.555
A0A1L8FG16	A0A1L8HZ53	A0A1L8FG16	A0A1L8HZ53	Uncharacterized protein.	Uncharacterized protein.	0.566
A0A1L8FG16	Cbl.S	A0A1L8FG16	A0A310TNL8	Uncharacterized protein.	Uncharacterized protein.	0.556
A0A1L8FG16	Cblb.L	A0A1L8FG16	A0A1L8HGE9	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A1L8FG16	Cblb.S	A0A1L8FG16	A0A1L8H8G5	Uncharacterized protein.	Uncharacterized protein.	0.499
A0A1L8FG16	Lck.L	A0A1L8FG16	A0A1L8HFJ7	Uncharacterized protein.	Tyrosine-protein kinase.	0.486
A0A1L8FG16	PIK3R1	A0A1L8FG16	B7ZRD8	Uncharacterized protein.	Phosphoinositide-3-kinase.	0.555
A0A1L8FG16	Shc1.L	A0A1L8FG16	A0A1L8FDE2	Uncharacterized protein.	Uncharacterized protein.	0.566
A0A1L8FG16	Syk.S	A0A1L8FG16	A0A1L8HPI7	Uncharacterized protein.	Tyrosine-protein kinase.	0.953
A0A1L8FG16	cbl	A0A1L8FG16	A0A1L8FLE4	Uncharacterized protein.	Uncharacterized protein.	0.540
A0A1L8FG16	grap	A0A1L8FG16	A0A1L8EQV4	Uncharacterized protein.	Uncharacterized protein.	0.680
A0A1L8FG16	grap-2	A0A1L8FG16	A0A1L8EYI9	Uncharacterized protein.	Uncharacterized protein.	0.680
A0A1L8FG16	grap2	A0A1L8FG16	A0A1L8GGZ3	Uncharacterized protein.	Uncharacterized protein.	0.688
A0A1L8FG16	grap2-2	A0A1L8FG16	A0A1L8GNT4	Uncharacterized protein.	Uncharacterized protein.	0.688
A0A1L8FG16	grb2	A0A1L8FG16	A0A1L8EMZ6	Uncharacterized protein.	Uncharacterized protein.	0.917