62 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	exoc8	PH domain-containing protein. (685 aa)
	Nsf	Uncharacterized protein. (734 aa)
	A0A1L8ELB7	SEC7 domain-containing protein. (1794 aa)
	Arfrp1.S	Uncharacterized protein. (243 aa)
	gga3	Uncharacterized protein. (713 aa)
	vps35l	Uncharacterized protein. (960 aa)
	Llgl1.S	WD_REPEATS_REGION domain-containing protein. (999 aa)
	A0A1L8ESG8	Uncharacterized protein; Belongs to the AAA ATPase family. (600 aa)
	A0A1L8ESK4	SEC7 domain-containing protein. (1791 aa)
	A0A1L8ET98	Uncharacterized protein. (201 aa)
	ccdc93	KOG2701 domain-containing protein. (609 aa)
	A0A1L8EXP4	Uncharacterized protein. (102 aa)
	A0A1L8EXQ7	Uncharacterized protein. (731 aa)
	A0A1L8EYQ3	LLGL domain-containing protein. (1049 aa)
	exoc5	Uncharacterized protein. (708 aa)
	ccdc22	Uncharacterized protein. (632 aa)
	golph3l	Uncharacterized protein. (280 aa)
	A0A1L8F7D0	Erf4 domain-containing protein. (215 aa)
	Amn.L	Uncharacterized protein. (535 aa)
	Stxbp6.L	V-SNARE coiled-coil homology domain-containing protein. (235 aa)
	golph3l-2	Uncharacterized protein. (278 aa)
	A0A1L8FED9	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (773 aa)
	A0A1L8FEH6	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (182 aa)
	A0A1L8FGH7	V-SNARE coiled-coil homology domain-containing protein. (191 aa)
	A0A1L8FJ46	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (803 aa)
	A0A1L8FQV4	Uncharacterized protein. (488 aa)
	rab31	Uncharacterized protein. (194 aa)
	A0A1L8FVL9	Uncharacterized protein. (488 aa)
	golga4	Uncharacterized protein. (2115 aa)
	exoc2	Exocyst complex component 2; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. (925 aa)
	A0A1L8FYH6	Uncharacterized protein. (155 aa)
	Prepl	Uncharacterized protein. (707 aa)
	C16orf70.S	Uncharacterized protein. (423 aa)
	Bbs2.S	Uncharacterized protein. (761 aa)
	bbs1	BBS1 domain-containing protein. (588 aa)
	C16orf70.L	Uncharacterized protein. (423 aa)
	gga1	Uncharacterized protein. (624 aa)
	vamp5	V-SNARE coiled-coil homology domain-containing protein. (99 aa)
	A0A1L8GXG7	Sec3-PIP2_bind domain-containing protein. (171 aa)
	exoc4	Sec8_exocyst domain-containing protein. (968 aa)
	A0A1L8H1M3	V-SNARE coiled-coil homology domain-containing protein. (95 aa)
	Blzf1.S	Uncharacterized protein. (393 aa)
	rabep1	Uncharacterized protein. (853 aa)
	blzf1	Uncharacterized protein. (393 aa)
	rabep1-2	Uncharacterized protein. (853 aa)
	A0A1L8HKG9	Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. (799 aa)
	A0A1L8HL93	Sec3-PIP2_bind domain-containing protein. (171 aa)
	Exoc1.S	Sec3-PIP2_bind domain-containing protein. (827 aa)
	Golph3.S	Uncharacterized protein. (290 aa)
	A0A1L8HSJ9	Uncharacterized protein. (475 aa)
	A0A1L8HSK3	Uncharacterized protein. (510 aa)
	A0A1L8HTS1	Sec3-PIP2_bind domain-containing protein. (171 aa)
	A0A1L8HTU1	Erf4 domain-containing protein. (166 aa)
	A0A1L8HU02	Uncharacterized protein. (653 aa)
	A0A310UCU9	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (181 aa)
	vamp1	LOC495063 protein. (101 aa)
	golph3	LOC495055 protein. (288 aa)
	MGC83291	Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (156 aa)
	chic2	Chic2-prov protein. (166 aa)
	exoc5-2	MGC80624 protein. (708 aa)
	gga1-2	MGC82581 protein. (625 aa)
	sys1	Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family. (156 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ESG8	A0A1L8ET98	A0A1L8ESG8	A0A1L8ET98	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.568
A0A1L8ESG8	A0A1L8FGH7	A0A1L8ESG8	A0A1L8FGH7	Uncharacterized protein; Belongs to the AAA ATPase family.	V-SNARE coiled-coil homology domain-containing protein.	0.840
A0A1L8ESG8	A0A1L8H1M3	A0A1L8ESG8	A0A1L8H1M3	Uncharacterized protein; Belongs to the AAA ATPase family.	V-SNARE coiled-coil homology domain-containing protein.	0.701
A0A1L8ESG8	Arfrp1.S	A0A1L8ESG8	A0A1L8ELY5	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.568
A0A1L8ESG8	golga4	A0A1L8ESG8	A0A1L8FWT0	Uncharacterized protein; Belongs to the AAA ATPase family.	Uncharacterized protein.	0.427
A0A1L8ESG8	vamp1	A0A1L8ESG8	Q5XH53	Uncharacterized protein; Belongs to the AAA ATPase family.	LOC495063 protein.	0.840
A0A1L8ESG8	vamp5	A0A1L8ESG8	A0A1L8GRY9	Uncharacterized protein; Belongs to the AAA ATPase family.	V-SNARE coiled-coil homology domain-containing protein.	0.701
A0A1L8ET98	A0A1L8ESG8	A0A1L8ET98	A0A1L8ESG8	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.568
A0A1L8ET98	A0A1L8FEH6	A0A1L8ET98	A0A1L8FEH6	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.570
A0A1L8ET98	A0A310UCU9	A0A1L8ET98	A0A310UCU9	Uncharacterized protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.570
A0A1L8ET98	MGC83291	A0A1L8ET98	Q641B6	Uncharacterized protein.	Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.	0.829
A0A1L8ET98	Nsf	A0A1L8ET98	A0A1L8ELA3	Uncharacterized protein.	Uncharacterized protein.	0.589
A0A1L8ET98	golga4	A0A1L8ET98	A0A1L8FWT0	Uncharacterized protein.	Uncharacterized protein.	0.585
A0A1L8ET98	sys1	A0A1L8ET98	Q8AVL4	Uncharacterized protein.	Protein SYS1 homolog; Involved in protein trafficking. Belongs to the SYS1 family.	0.829
A0A1L8EXP4	ccdc22	A0A1L8EXP4	A0A1L8F1I6	Uncharacterized protein.	Uncharacterized protein.	0.680
A0A1L8EXP4	ccdc93	A0A1L8EXP4	A0A1L8EV41	Uncharacterized protein.	KOG2701 domain-containing protein.	0.583
A0A1L8EXQ7	ccdc22	A0A1L8EXQ7	A0A1L8F1I6	Uncharacterized protein.	Uncharacterized protein.	0.680
A0A1L8EXQ7	ccdc93	A0A1L8EXQ7	A0A1L8EV41	Uncharacterized protein.	KOG2701 domain-containing protein.	0.583
A0A1L8EYQ3	exoc4	A0A1L8EYQ3	A0A1L8GZQ8	LLGL domain-containing protein.	Sec8_exocyst domain-containing protein.	0.577
A0A1L8EYQ3	exoc8	A0A1L8EYQ3	A0A1L8G2I8	LLGL domain-containing protein.	PH domain-containing protein.	0.437