101 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mecp2	Methyl-CpG-binding protein 2; Chromosomal protein that binds to methylated DNA. It can bind specifically to a single methyl-CpG pair. It is not influenced by sequences flanking the methyl-CpGs. Binds both 5-methylcytosine (5mC) and 5-hydroxymethylcytosine (5hmC)-containing DNA, with a preference for 5-methylcytosine (5mC). (467 aa)
	baiap2	Uncharacterized protein. (579 aa)
	ntn1	Uncharacterized protein. (602 aa)
	A0A1L8EPF6	DMAP-interaction domain-containing protein. (1551 aa)
	Map2.S	Microtubule-associated protein. (1811 aa)
	Klf7.S	Uncharacterized protein. (293 aa)
	ntn3	Uncharacterized protein. (588 aa)
	baiap2-2	Uncharacterized protein. (523 aa)
	ntn1-2	Uncharacterized protein. (602 aa)
	A0A1L8EWJ4	DMAP-interaction domain-containing protein. (1573 aa)
	Map2.L	Microtubule-associated protein. (1769 aa)
	klf7	Uncharacterized protein. (296 aa)
	ntn3-2	Uncharacterized protein. (588 aa)
	Pak3.L	Non-specific serine/threonine protein kinase. (564 aa)
	A0A1L8F2Q7	Uncharacterized protein. (359 aa)
	Klhl4.S	BTB domain-containing protein. (719 aa)
	A0A1L8F3B4	Uncharacterized protein. (1076 aa)
	Nkpd1.S	KAP NTPase domain-containing protein. (729 aa)
	A0A1L8F7J4	Uncharacterized protein. (359 aa)
	klhl4	BTB domain-containing protein. (719 aa)
	A0A1L8F824	Uncharacterized protein. (1116 aa)
	Nkpd1.L	KAP NTPase domain-containing protein. (725 aa)
	A0A1L8F8C1	KAP NTPase domain-containing protein. (662 aa)
	A0A1L8FGA0	Uncharacterized protein. (191 aa)
	ntn5	Uncharacterized protein. (601 aa)
	A0A1L8FGY3	Uncharacterized protein. (1917 aa)
	A0A1L8FH78	Uncharacterized protein. (546 aa)
	A0A1L8FHG6	Uncharacterized protein. (712 aa)
	znf365-2	Uncharacterized protein. (396 aa)
	A0A1L8FNA1	SAM domain-containing protein. (1246 aa)
	A0A1L8FNB3	ANK_REP_REGION domain-containing protein. (639 aa)
	tmem106b	Uncharacterized protein. (271 aa)
	fam206a	Uncharacterized protein. (183 aa)
	A0A1L8FVF6	Uncharacterized protein. (476 aa)
	A0A1L8FY03	Phosphatase and actin regulator. (641 aa)
	Dtnbp1.L	Uncharacterized protein. (317 aa)
	Ephb3	Uncharacterized protein. (974 aa)
	Dock10.S	Uncharacterized protein; Belongs to the DOCK family. (2159 aa)
	Pak2.S	Non-specific serine/threonine protein kinase. (517 aa)
	kidins220	ANK_REP_REGION domain-containing protein. (1742 aa)
	Ephb1-b	Uncharacterized protein. (1003 aa)
	A0A1L8G773	BTB domain-containing protein. (461 aa)
	A0A1L8GAE1	Uncharacterized protein; Belongs to the DOCK family. (2181 aa)
	A0A1L8GB36	Uncharacterized protein. (986 aa)
	kidins220-2	ANK_REP_REGION domain-containing protein. (1746 aa)
	A0A1L8GBH3	Non-specific serine/threonine protein kinase. (518 aa)
	flrt1	Fibronectin type-III domain-containing protein. (682 aa)
	Prmt3.S	Uncharacterized protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (519 aa)
	A0A1L8GIE3	Uncharacterized protein. (97 aa)
	flrt1-2	Fibronectin type-III domain-containing protein. (679 aa)
	bbs1	BBS1 domain-containing protein. (588 aa)
	lamc2	Uncharacterized protein. (1170 aa)
	A0A1L8GQG5	Sulfotransferase; Belongs to the sulfotransferase 1 family. (239 aa)
	A0A1L8GQJ5	Uncharacterized protein. (161 aa)
	map1a	Uncharacterized protein. (3176 aa)
	A0A1L8GTC8	TPR_REGION domain-containing protein. (516 aa)
	A0A1L8GTK6	Uncharacterized protein. (1885 aa)
	A0A1L8GUH5	Uncharacterized protein. (1084 aa)
	A0A1L8GYH5	Uncharacterized protein. (1113 aa)
	reln	Uncharacterized protein. (3461 aa)
	A0A1L8GZQ2	Uncharacterized protein. (1444 aa)
	Map1a.L	Uncharacterized protein. (3205 aa)
	A0A1L8H4G5	Receptor protein-tyrosine kinase. (245 aa)
	A0A1L8H564	BPTI/Kunitz inhibitor domain-containing protein. (751 aa)
	A0A1L8H600	Uncharacterized protein. (872 aa)
	crk	Uncharacterized protein. (297 aa)
	nck2	Cytoplasmic protein. (381 aa)
	A0A1L8H926	Uncharacterized protein. (1329 aa)
	A0A1L8HAK1	Uncharacterized protein. (743 aa)
	A0A1L8HB73	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (321 aa)
	A0A1L8HB89	Uncharacterized protein. (394 aa)
	App.L	BPTI/Kunitz inhibitor domain-containing protein. (749 aa)
	Crk.L	Uncharacterized protein. (297 aa)
	scarf1	Uncharacterized protein. (889 aa)
	nck2-2	Cytoplasmic protein. (381 aa)
	A0A1L8HH72	Uncharacterized protein. (1290 aa)
	A0A1L8HH94	Uncharacterized protein. (69 aa)
	A0A1L8HIV3	Uncharacterized protein. (729 aa)
	A0A1L8HJW1	Uncharacterized protein. (392 aa)
	A0A1L8HJX3	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (459 aa)
	A0A1L8HNU7	Uncharacterized protein. (1127 aa)
	nfatc4	RHD domain-containing protein. (1086 aa)
	map1b	Uncharacterized protein. (2247 aa)
	A0A1L8HTK4	BTB domain-containing protein. (581 aa)
	A0A1L8HTL3	Uncharacterized protein. (43 aa)
	A0A1L8HWV0	Uncharacterized protein. (510 aa)
	A0A1L8HXF7	Uncharacterized protein. (1315 aa)
	A0A1L8HYF0	Uncharacterized protein. (1124 aa)
	nfatc4-2	RHD domain-containing protein. (1081 aa)
	map1b-2	Uncharacterized protein. (2255 aa)
	XEphB2	Uncharacterized protein. (990 aa)
	Trappc4.S	Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family. (224 aa)
	ntn5-2	LOC100127305 protein. (601 aa)
	pak3	Non-specific serine/threonine protein kinase. (549 aa)
	sdc2-2	Syndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (191 aa)
	btbd3	BTB domain protein 3. (519 aa)
	crkl	MGC84382 protein. (302 aa)
	sult4a1	Sulfotransferase; Belongs to the sulfotransferase 1 family. (284 aa)
	ephb3	MGC83457 protein. (974 aa)
	tmem106b-2	MGC80476 protein. (271 aa)
	crkl-2	MGC81407 protein. (302 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F2Q7	A0A1L8HAK1	A0A1L8F2Q7	A0A1L8HAK1	Uncharacterized protein.	Uncharacterized protein.	0.684
A0A1L8F2Q7	A0A1L8HIV3	A0A1L8F2Q7	A0A1L8HIV3	Uncharacterized protein.	Uncharacterized protein.	0.684
A0A1L8F3B4	A0A1L8FGA0	A0A1L8F3B4	A0A1L8FGA0	Uncharacterized protein.	Uncharacterized protein.	0.889
A0A1L8F7J4	A0A1L8HAK1	A0A1L8F7J4	A0A1L8HAK1	Uncharacterized protein.	Uncharacterized protein.	0.684
A0A1L8F7J4	A0A1L8HIV3	A0A1L8F7J4	A0A1L8HIV3	Uncharacterized protein.	Uncharacterized protein.	0.684
A0A1L8F824	A0A1L8FGA0	A0A1L8F824	A0A1L8FGA0	Uncharacterized protein.	Uncharacterized protein.	0.889
A0A1L8F8C1	Crk.L	A0A1L8F8C1	A0A1L8HDP2	KAP NTPase domain-containing protein.	Uncharacterized protein.	0.584
A0A1L8F8C1	crk	A0A1L8F8C1	A0A1L8H629	KAP NTPase domain-containing protein.	Uncharacterized protein.	0.584
A0A1L8F8C1	crkl	A0A1L8F8C1	Q66KG8	KAP NTPase domain-containing protein.	MGC84382 protein.	0.545
A0A1L8F8C1	crkl-2	A0A1L8F8C1	Q6NTZ1	KAP NTPase domain-containing protein.	MGC81407 protein.	0.545
A0A1L8FGA0	A0A1L8F3B4	A0A1L8FGA0	A0A1L8F3B4	Uncharacterized protein.	Uncharacterized protein.	0.889
A0A1L8FGA0	A0A1L8F824	A0A1L8FGA0	A0A1L8F824	Uncharacterized protein.	Uncharacterized protein.	0.889
A0A1L8FGA0	A0A1L8FGY3	A0A1L8FGA0	A0A1L8FGY3	Uncharacterized protein.	Uncharacterized protein.	0.417
A0A1L8FGA0	A0A1L8FH78	A0A1L8FGA0	A0A1L8FH78	Uncharacterized protein.	Uncharacterized protein.	0.617
A0A1L8FGA0	A0A1L8FNA1	A0A1L8FGA0	A0A1L8FNA1	Uncharacterized protein.	SAM domain-containing protein.	0.417
A0A1L8FGA0	A0A1L8FNB3	A0A1L8FGA0	A0A1L8FNB3	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.417
A0A1L8FGA0	A0A1L8FVF6	A0A1L8FGA0	A0A1L8FVF6	Uncharacterized protein.	Uncharacterized protein.	0.840
A0A1L8FGA0	A0A1L8GAE1	A0A1L8FGA0	A0A1L8GAE1	Uncharacterized protein.	Uncharacterized protein; Belongs to the DOCK family.	0.963
A0A1L8FGA0	A0A1L8GBH3	A0A1L8FGA0	A0A1L8GBH3	Uncharacterized protein.	Non-specific serine/threonine protein kinase.	0.995
A0A1L8FGA0	A0A1L8GTK6	A0A1L8FGA0	A0A1L8GTK6	Uncharacterized protein.	Uncharacterized protein.	0.438