(16 nodes) Lipid glycosylation network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	slc35c1-2	TPT domain-containing protein. (364 aa)
	slc35c1	TPT domain-containing protein. (363 aa)
	St3gal4.L	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (393 aa)
	A0A1L8FFP6	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (310 aa)
	A0A1L8FFN1	Uncharacterized protein; Belongs to the glycosyltransferase 29 family. (347 aa)
	gba	Glucosylceramidase. (519 aa)
	A0A1L8F6B0	Uncharacterized protein. (359 aa)
	abo.2	Uncharacterized protein. (371 aa)
	A0A1L8F693	Uncharacterized protein. (286 aa)
	A0A1L8F689	Uncharacterized protein. (231 aa)
	A0A1L8F682	Uncharacterized protein. (268 aa)
	Tmem130.L	PKD domain-containing protein. (358 aa)
	tmem130	PKD domain-containing protein. (426 aa)
	b4galnt1	Beta-1,4 N-acetylgalactosaminyltransferase. (526 aa)
	b4galnt1-2	Beta-1,4 N-acetylgalactosaminyltransferase. (566 aa)
	A0A310TQ27	Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide. (851 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F682	A0A1L8F693	A0A1L8F682	A0A1L8F693	Uncharacterized protein.	Uncharacterized protein.	0.655
A0A1L8F682	A0A1L8F6B0	A0A1L8F682	A0A1L8F6B0	Uncharacterized protein.	Uncharacterized protein.	0.656
A0A1L8F682	abo.2	A0A1L8F682	A0A1L8F696	Uncharacterized protein.	Uncharacterized protein.	0.655
A0A1L8F693	A0A1L8F682	A0A1L8F693	A0A1L8F682	Uncharacterized protein.	Uncharacterized protein.	0.655
A0A1L8F693	A0A1L8F6B0	A0A1L8F693	A0A1L8F6B0	Uncharacterized protein.	Uncharacterized protein.	0.655
A0A1L8F693	abo.2	A0A1L8F693	A0A1L8F696	Uncharacterized protein.	Uncharacterized protein.	0.654
A0A1L8F6B0	A0A1L8F682	A0A1L8F6B0	A0A1L8F682	Uncharacterized protein.	Uncharacterized protein.	0.656
A0A1L8F6B0	A0A1L8F693	A0A1L8F6B0	A0A1L8F693	Uncharacterized protein.	Uncharacterized protein.	0.655
A0A1L8F6B0	abo.2	A0A1L8F6B0	A0A1L8F696	Uncharacterized protein.	Uncharacterized protein.	0.657
A0A1L8FFP6	St3gal4.L	A0A1L8FFP6	A0A1L8FL66	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.900
A0A310TQ27	gba	A0A310TQ27	A0A1L8FDF0	Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.	Glucosylceramidase.	0.937
St3gal4.L	A0A1L8FFP6	A0A1L8FL66	A0A1L8FFP6	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	Uncharacterized protein; Belongs to the glycosyltransferase 29 family.	0.900
abo.2	A0A1L8F682	A0A1L8F696	A0A1L8F682	Uncharacterized protein.	Uncharacterized protein.	0.655
abo.2	A0A1L8F693	A0A1L8F696	A0A1L8F693	Uncharacterized protein.	Uncharacterized protein.	0.654
abo.2	A0A1L8F6B0	A0A1L8F696	A0A1L8F6B0	Uncharacterized protein.	Uncharacterized protein.	0.657
b4galnt1	b4galnt1-2	A0A1L8H9W8	A0A1L8HI56	Beta-1,4 N-acetylgalactosaminyltransferase.	Beta-1,4 N-acetylgalactosaminyltransferase.	0.900
b4galnt1-2	b4galnt1	A0A1L8HI56	A0A1L8H9W8	Beta-1,4 N-acetylgalactosaminyltransferase.	Beta-1,4 N-acetylgalactosaminyltransferase.	0.900
gba	A0A310TQ27	A0A1L8FDF0	A0A310TQ27	Glucosylceramidase.	Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.	0.937