15 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	card9-2	CARD domain-containing protein. (527 aa)
	A0A1L8EML9	Uncharacterized protein. (156 aa)
	A0A1L8EU83	Uncharacterized protein. (156 aa)
	rasgrp1	Uncharacterized protein. (814 aa)
	card9	CARD domain-containing protein. (527 aa)
	rasgrp1-2	Uncharacterized protein. (811 aa)
	A0A1L8FG12	Uncharacterized protein. (195 aa)
	A0A1L8FG29	Uncharacterized protein. (180 aa)
	A0A1L8FLR8	Uncharacterized protein. (183 aa)
	IL12B	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily. (316 aa)
	Il1b.L	Interleukin-1. (145 aa)
	A0A1L8H1M9	Interleukin-1. (282 aa)
	Syk.S	Tyrosine-protein kinase. (632 aa)
	syk	Tyrosine-protein kinase. (605 aa)
	il1b-A	Interleukin-1; Belongs to the IL-1 family. (283 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8FG12	A0A1L8FG29	A0A1L8FG12	A0A1L8FG29	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8FG12	A0A1L8H1M9	A0A1L8FG12	A0A1L8H1M9	Uncharacterized protein.	Interleukin-1.	0.439
A0A1L8FG12	IL12B	A0A1L8FG12	A0A1L8GR16	Uncharacterized protein.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.412
A0A1L8FG12	Il1b.L	A0A1L8FG12	A0A1L8H1M6	Uncharacterized protein.	Interleukin-1.	0.439
A0A1L8FG12	il1b-A	A0A1L8FG12	B7ZSG9	Uncharacterized protein.	Interleukin-1; Belongs to the IL-1 family.	0.439
A0A1L8FG29	A0A1L8FG12	A0A1L8FG29	A0A1L8FG12	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8FG29	A0A1L8H1M9	A0A1L8FG29	A0A1L8H1M9	Uncharacterized protein.	Interleukin-1.	0.439
A0A1L8FG29	IL12B	A0A1L8FG29	A0A1L8GR16	Uncharacterized protein.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.412
A0A1L8FG29	Il1b.L	A0A1L8FG29	A0A1L8H1M6	Uncharacterized protein.	Interleukin-1.	0.439
A0A1L8FG29	il1b-A	A0A1L8FG29	B7ZSG9	Uncharacterized protein.	Interleukin-1; Belongs to the IL-1 family.	0.439
A0A1L8FLR8	A0A1L8H1M9	A0A1L8FLR8	A0A1L8H1M9	Uncharacterized protein.	Interleukin-1.	0.439
A0A1L8FLR8	IL12B	A0A1L8FLR8	A0A1L8GR16	Uncharacterized protein.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.412
A0A1L8FLR8	Il1b.L	A0A1L8FLR8	A0A1L8H1M6	Uncharacterized protein.	Interleukin-1.	0.439
A0A1L8FLR8	il1b-A	A0A1L8FLR8	B7ZSG9	Uncharacterized protein.	Interleukin-1; Belongs to the IL-1 family.	0.439
A0A1L8H1M9	A0A1L8FG12	A0A1L8H1M9	A0A1L8FG12	Interleukin-1.	Uncharacterized protein.	0.439
A0A1L8H1M9	A0A1L8FG29	A0A1L8H1M9	A0A1L8FG29	Interleukin-1.	Uncharacterized protein.	0.439
A0A1L8H1M9	A0A1L8FLR8	A0A1L8H1M9	A0A1L8FLR8	Interleukin-1.	Uncharacterized protein.	0.439
A0A1L8H1M9	IL12B	A0A1L8H1M9	A0A1L8GR16	Interleukin-1.	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	0.431
IL12B	A0A1L8FG12	A0A1L8GR16	A0A1L8FG12	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	Uncharacterized protein.	0.412
IL12B	A0A1L8FG29	A0A1L8GR16	A0A1L8FG29	Interleukin-12 subunit beta; Belongs to the type I cytokine receptor family. Type 3 subfamily.	Uncharacterized protein.	0.412