(28 nodes) Melanosome membrane network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	tyrp1-2	Tyrp1-prov protein. (534 aa)
	A0A1L8H991	Uncharacterized protein. (220 aa)
	A0A1L8H8R3	CitMHS domain-containing protein. (699 aa)
	gpr143	Uncharacterized protein. (414 aa)
	A0A1L8GY48	BH4_AAA_HYDROXYL_2 domain-containing protein. (487 aa)
	Th.L	BH4_AAA_HYDROXYL_2 domain-containing protein. (454 aa)
	A0A1L8GDP9	Uncharacterized protein. (457 aa)
	rab32	Uncharacterized protein. (222 aa)
	Dtnbp1.L	Uncharacterized protein. (317 aa)
	A0A1L8F705	Uncharacterized protein. (393 aa)
	A0A1L8EWN4	Uncharacterized protein. (240 aa)
	abcb6	Uncharacterized protein. (849 aa)
	A0A1L8ERV8	Uncharacterized protein. (185 aa)
	Mreg.S	Uncharacterized protein. (248 aa)
	A0A1L8EKR9	Uncharacterized protein. (237 aa)
	tyr	Uncharacterized protein. (532 aa)
	rab38	Uncharacterized protein. (212 aa)
	Ctns.L	Uncharacterized protein. (375 aa)
	gpr143-2	G_PROTEIN_RECEP_F2_4 domain-containing protein. (414 aa)
	A0A1L8HH36	CitMHS domain-containing protein. (850 aa)
	dct	Uncharacterized protein. (520 aa)
	rab38-2	Uncharacterized protein. (211 aa)
	tyrp1	Uncharacterized protein. (534 aa)
	gpnmb	LOC733250 protein. (597 aa)
	LOC100037231	LOC100037231 protein. (209 aa)
	rab32-2	MGC130912 protein. (222 aa)
	rab7a	Rab7-prov protein. (207 aa)
	rab7a-2	MGC68523 protein. (207 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F705	tyr	A0A1L8F705	A0A1L8HAY8	Uncharacterized protein.	Uncharacterized protein.	0.461
A0A1L8H8R3	A0A1L8H991	A0A1L8H8R3	A0A1L8H991	CitMHS domain-containing protein.	Uncharacterized protein.	0.571
A0A1L8H8R3	tyr	A0A1L8H8R3	A0A1L8HAY8	CitMHS domain-containing protein.	Uncharacterized protein.	0.626
A0A1L8H8R3	tyrp1	A0A1L8H8R3	A0A1L8HNZ5	CitMHS domain-containing protein.	Uncharacterized protein.	0.577
A0A1L8H8R3	tyrp1-2	A0A1L8H8R3	Q7ZYE8	CitMHS domain-containing protein.	Tyrp1-prov protein.	0.577
A0A1L8H991	A0A1L8H8R3	A0A1L8H991	A0A1L8H8R3	Uncharacterized protein.	CitMHS domain-containing protein.	0.571
A0A1L8H991	A0A1L8HH36	A0A1L8H991	A0A1L8HH36	Uncharacterized protein.	CitMHS domain-containing protein.	0.571
A0A1L8H991	LOC100037231	A0A1L8H991	A2VDE1	Uncharacterized protein.	LOC100037231 protein.	0.488
A0A1L8H991	gpnmb	A0A1L8H991	A1L3E3	Uncharacterized protein.	LOC733250 protein.	0.578
A0A1L8H991	rab32	A0A1L8H991	A0A1L8G7U2	Uncharacterized protein.	Uncharacterized protein.	0.488
A0A1L8H991	rab32-2	A0A1L8H991	Q32NR6	Uncharacterized protein.	MGC130912 protein.	0.488
A0A1L8H991	rab38	A0A1L8H991	A0A1L8HB03	Uncharacterized protein.	Uncharacterized protein.	0.488
A0A1L8H991	rab38-2	A0A1L8H991	A0A1L8HJH6	Uncharacterized protein.	Uncharacterized protein.	0.488
A0A1L8H991	tyr	A0A1L8H991	A0A1L8HAY8	Uncharacterized protein.	Uncharacterized protein.	0.553
A0A1L8HH36	A0A1L8H991	A0A1L8HH36	A0A1L8H991	CitMHS domain-containing protein.	Uncharacterized protein.	0.571
A0A1L8HH36	tyr	A0A1L8HH36	A0A1L8HAY8	CitMHS domain-containing protein.	Uncharacterized protein.	0.626
A0A1L8HH36	tyrp1	A0A1L8HH36	A0A1L8HNZ5	CitMHS domain-containing protein.	Uncharacterized protein.	0.577
A0A1L8HH36	tyrp1-2	A0A1L8HH36	Q7ZYE8	CitMHS domain-containing protein.	Tyrp1-prov protein.	0.577
LOC100037231	A0A1L8H991	A2VDE1	A0A1L8H991	LOC100037231 protein.	Uncharacterized protein.	0.488
Mreg.S	tyrp1	A0A1L8EPS5	A0A1L8HNZ5	Uncharacterized protein.	Uncharacterized protein.	0.551