(45 nodes) Homotypic cell-cell adhesion network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8GQE6	Uncharacterized protein. (482 aa)
	fgb-2	Fibrinogen B-beta subunit. (488 aa)
	jup	LOC398496 protein. (737 aa)
	plpp3	Ppap2ba protein. (307 aa)
	ptpn6-2	Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily. (587 aa)
	fibp	MGC115383 protein. (356 aa)
	gata1a-A	GATA binding factor-1. (359 aa)
	itgb3	Integrin beta; Belongs to the integrin beta chain family. (788 aa)
	A0A310U0X3	Uncharacterized protein. (73 aa)
	Megf10.L	Uncharacterized protein. (1035 aa)
	slc7a11-2	Uncharacterized protein. (500 aa)
	A0A1L8HU91	Fibrinogen C-terminal domain-containing protein. (403 aa)
	Megf10.S	Uncharacterized protein. (1080 aa)
	slc7a11	Uncharacterized protein. (500 aa)
	A0A1L8HLM6	Fibrinogen C-terminal domain-containing protein. (438 aa)
	fgb	Fibrinogen C-terminal domain-containing protein. (495 aa)
	A0A1L8HFH3	Uncharacterized protein. (1374 aa)
	A0A1L8HDB0	Uncharacterized protein. (190 aa)
	cxadr-2	Uncharacterized protein. (366 aa)
	A0A1L8H7X8	Uncharacterized protein. (1433 aa)
	cxadr	Uncharacterized protein. (421 aa)
	A0A1L8H4Q8	Uncharacterized protein. (204 aa)
	A0A1L8H3N6	Uncharacterized protein. (830 aa)
	A0A1L8H163	Uncharacterized protein. (1053 aa)
	Pkp2.L	Uncharacterized protein. (736 aa)
	A0A1L8GSA8	Uncharacterized protein. (1053 aa)
	A0A1L8GQA4	Uncharacterized protein. (760 aa)
	Stxbp3.L	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (589 aa)
	C-Mpl	Uncharacterized protein. (583 aa)
	A0A1L8GM78	acidPPc domain-containing protein. (342 aa)
	A0A1L8GJQ6	PH domain-containing protein. (660 aa)
	tspan32	Uncharacterized protein; Belongs to the tetraspanin (TM4SF) family. (259 aa)
	stxbp3	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family. (584 aa)
	p2ry12-2	G_PROTEIN_RECEP_F1_2 domain-containing protein. (350 aa)
	plek	Uncharacterized protein. (350 aa)
	p2ry12	G_PROTEIN_RECEP_F1_2 domain-containing protein. (350 aa)
	Bloc1s4.L	Uncharacterized protein. (217 aa)
	ubash3b-2	Uncharacterized protein. (640 aa)
	ubash3b	Uncharacterized protein. (640 aa)
	ptpn6	Uncharacterized protein. (687 aa)
	Pear1.L	Uncharacterized protein. (943 aa)
	A0A1L8F4M9	Uncharacterized protein. (980 aa)
	gata1	Uncharacterized protein. (367 aa)
	Tyro3.S	Uncharacterized protein. (832 aa)
	Jup.S	Uncharacterized protein. (791 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F4M9	itgb3	A0A1L8F4M9	B7ZQZ8	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.464
A0A1L8GJQ6	itgb3	A0A1L8GJQ6	B7ZQZ8	PH domain-containing protein.	Integrin beta; Belongs to the integrin beta chain family.	0.764
A0A1L8GJQ6	plek	A0A1L8GJQ6	A0A1L8G6R7	PH domain-containing protein.	Uncharacterized protein.	0.573
A0A1L8GQA4	Jup.S	A0A1L8GQA4	A0A1L8EKG6	Uncharacterized protein.	Uncharacterized protein.	0.643
A0A1L8GQA4	jup	A0A1L8GQA4	Q6NU15	Uncharacterized protein.	LOC398496 protein.	0.954
A0A1L8GQE6	slc7a11	A0A1L8GQE6	A0A1L8HLX3	Uncharacterized protein.	Uncharacterized protein.	0.902
A0A1L8GQE6	slc7a11-2	A0A1L8GQE6	A0A1L8HUU5	Uncharacterized protein.	Uncharacterized protein.	0.902
A0A1L8H3N6	C-Mpl	A0A1L8H3N6	A0A1L8GM88	Uncharacterized protein.	Uncharacterized protein.	0.513
A0A1L8H3N6	itgb3	A0A1L8H3N6	B7ZQZ8	Uncharacterized protein.	Integrin beta; Belongs to the integrin beta chain family.	0.616
A0A1L8HLM6	fgb	A0A1L8HLM6	A0A1L8HLM3	Fibrinogen C-terminal domain-containing protein.	Fibrinogen C-terminal domain-containing protein.	0.998
A0A1L8HLM6	fgb-2	A0A1L8HLM6	Q91589	Fibrinogen C-terminal domain-containing protein.	Fibrinogen B-beta subunit.	0.998
A0A1L8HLM6	itgb3	A0A1L8HLM6	B7ZQZ8	Fibrinogen C-terminal domain-containing protein.	Integrin beta; Belongs to the integrin beta chain family.	0.598
A0A1L8HU91	fgb	A0A1L8HU91	A0A1L8HLM3	Fibrinogen C-terminal domain-containing protein.	Fibrinogen C-terminal domain-containing protein.	0.997
A0A1L8HU91	fgb-2	A0A1L8HU91	Q91589	Fibrinogen C-terminal domain-containing protein.	Fibrinogen B-beta subunit.	0.997
A0A1L8HU91	itgb3	A0A1L8HU91	B7ZQZ8	Fibrinogen C-terminal domain-containing protein.	Integrin beta; Belongs to the integrin beta chain family.	0.598
A0A310U0X3	Jup.S	A0A310U0X3	A0A1L8EKG6	Uncharacterized protein.	Uncharacterized protein.	0.643
A0A310U0X3	jup	A0A310U0X3	Q6NU15	Uncharacterized protein.	LOC398496 protein.	0.643
C-Mpl	A0A1L8H3N6	A0A1L8GM88	A0A1L8H3N6	Uncharacterized protein.	Uncharacterized protein.	0.513
C-Mpl	gata1	A0A1L8GM88	A0A1L8F426	Uncharacterized protein.	Uncharacterized protein.	0.540
C-Mpl	gata1a-A	A0A1L8GM88	B7ZR33	Uncharacterized protein.	GATA binding factor-1.	0.540