28 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8GLH9	RNase_PH domain-containing protein. (268 aa)
	exosc4	LOC495942 protein. (249 aa)
	exosc3	MGC84934 protein. (250 aa)
	Exosc9.L	Uncharacterized protein. (431 aa)
	A0A1L8HIV8	Uncharacterized protein. (276 aa)
	Ints6.L	VWFA domain-containing protein. (883 aa)
	Exosc8.S	Uncharacterized protein. (159 aa)
	A0A1L8HAF5	RNase_PH domain-containing protein. (113 aa)
	A0A1L8HAC4	Uncharacterized protein. (974 aa)
	ints2	Uncharacterized protein. (1175 aa)
	ints14	VWFA domain-containing protein. (518 aa)
	toe1-2	C3H1-type domain-containing protein. (515 aa)
	usb1	U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (251 aa)
	tut1	RRM domain-containing protein. (864 aa)
	ints5	Uncharacterized protein. (939 aa)
	toe1	C3H1-type domain-containing protein. (520 aa)
	A0A1L8GCX3	Uncharacterized protein. (939 aa)
	Ints9.S	Beta-Casp domain-containing protein. (600 aa)
	Ints7.S	Uncharacterized protein. (978 aa)
	A0A1L8FWN1	Uncharacterized protein. (267 aa)
	Ints8.S	Uncharacterized protein. (1006 aa)
	Exosc7.S	Uncharacterized protein. (282 aa)
	exosc5	RNase_PH domain-containing protein. (286 aa)
	A0A1L8F7Y8	VWFA domain-containing protein. (896 aa)
	A0A1L8F3A1	VWFA domain-containing protein. (769 aa)
	Exosc2.L	KH_dom_type_1 domain-containing protein. (154 aa)
	A0A1L8F1G0	ECR1_N domain-containing protein. (146 aa)
	ints1	DUF3677 domain-containing protein. (2191 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F1G0	A0A1L8FWN1	A0A1L8F1G0	A0A1L8FWN1	ECR1_N domain-containing protein.	Uncharacterized protein.	0.990
A0A1L8F1G0	A0A1L8GLH9	A0A1L8F1G0	A0A1L8GLH9	ECR1_N domain-containing protein.	RNase_PH domain-containing protein.	0.993
A0A1L8F1G0	A0A1L8HAF5	A0A1L8F1G0	A0A1L8HAF5	ECR1_N domain-containing protein.	RNase_PH domain-containing protein.	0.966
A0A1L8F1G0	A0A1L8HIV8	A0A1L8F1G0	A0A1L8HIV8	ECR1_N domain-containing protein.	Uncharacterized protein.	0.966
A0A1L8F1G0	Exosc2.L	A0A1L8F1G0	A0A1L8F1G4	ECR1_N domain-containing protein.	KH_dom_type_1 domain-containing protein.	0.457
A0A1L8F1G0	Exosc7.S	A0A1L8F1G0	A0A1L8FRR7	ECR1_N domain-containing protein.	Uncharacterized protein.	0.990
A0A1L8F1G0	Exosc8.S	A0A1L8F1G0	A0A1L8HAP0	ECR1_N domain-containing protein.	Uncharacterized protein.	0.966
A0A1L8F1G0	Exosc9.L	A0A1L8F1G0	A0A1L8HUY5	ECR1_N domain-containing protein.	Uncharacterized protein.	0.995
A0A1L8F1G0	exosc3	A0A1L8F1G0	Q58E93	ECR1_N domain-containing protein.	MGC84934 protein.	0.996
A0A1L8F1G0	exosc4	A0A1L8F1G0	Q5PQ94	ECR1_N domain-containing protein.	LOC495942 protein.	0.997
A0A1L8F1G0	exosc5	A0A1L8F1G0	A0A1L8F8X8	ECR1_N domain-containing protein.	RNase_PH domain-containing protein.	0.996
A0A1L8F1G0	toe1	A0A1L8F1G0	A0A1L8GFN0	ECR1_N domain-containing protein.	C3H1-type domain-containing protein.	0.488
A0A1L8F1G0	toe1-2	A0A1L8F1G0	A0A1L8GM42	ECR1_N domain-containing protein.	C3H1-type domain-containing protein.	0.488
A0A1L8F3A1	A0A1L8GCX3	A0A1L8F3A1	A0A1L8GCX3	VWFA domain-containing protein.	Uncharacterized protein.	0.819
A0A1L8F3A1	Ints7.S	A0A1L8F3A1	A0A1L8G173	VWFA domain-containing protein.	Uncharacterized protein.	0.918
A0A1L8F3A1	Ints8.S	A0A1L8F3A1	A0A1L8FTK5	VWFA domain-containing protein.	Uncharacterized protein.	0.882
A0A1L8F3A1	Ints9.S	A0A1L8F3A1	A0A1L8G5L4	VWFA domain-containing protein.	Beta-Casp domain-containing protein.	0.916
A0A1L8F3A1	ints1	A0A1L8F3A1	A0A1L8EXS4	VWFA domain-containing protein.	DUF3677 domain-containing protein.	0.923
A0A1L8F3A1	ints14	A0A1L8F3A1	A0A1L8GSI6	VWFA domain-containing protein.	VWFA domain-containing protein.	0.872
A0A1L8F3A1	ints2	A0A1L8F3A1	A0A1L8H7Z9	VWFA domain-containing protein.	Uncharacterized protein.	0.918