(12 nodes) T-helper 2 cell differentiation network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8H7W4	Uncharacterized protein. (139 aa)
	Gata3.L	Uncharacterized protein. (454 aa)
	A0A1L8G6C6	Homeobox domain-containing protein. (387 aa)
	A0A1L8G189	Homeobox domain-containing protein. (381 aa)
	batf	BZIP domain-containing protein. (115 aa)
	Batf.S	BZIP domain-containing protein. (115 aa)
	A0A1L8EXY7	Fibronectin type-III domain-containing protein. (903 aa)
	A0A1L8EQA7	Fibronectin type-III domain-containing protein. (866 aa)
	A0A1L8EQ99	Fibronectin type-III domain-containing protein. (954 aa)
	A0A1L8HAR8	Uncharacterized protein. (139 aa)
	A0A1L8H9B5	Uncharacterized protein. (111 aa)
	gata3	XGATA-3 protein. (435 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EQ99	A0A1L8EXY7	A0A1L8EQ99	A0A1L8EXY7	Fibronectin type-III domain-containing protein.	Fibronectin type-III domain-containing protein.	0.900
A0A1L8EXY7	A0A1L8EQ99	A0A1L8EXY7	A0A1L8EQ99	Fibronectin type-III domain-containing protein.	Fibronectin type-III domain-containing protein.	0.900
Batf.S	Gata3.L	A0A1L8F0K4	A0A1L8GZI0	BZIP domain-containing protein.	Uncharacterized protein.	0.403
Batf.S	gata3	A0A1L8F0K4	Q2TAR8	BZIP domain-containing protein.	XGATA-3 protein.	0.403
Gata3.L	Batf.S	A0A1L8GZI0	A0A1L8F0K4	Uncharacterized protein.	BZIP domain-containing protein.	0.403
Gata3.L	batf	A0A1L8GZI0	A0A1L8F9C6	Uncharacterized protein.	BZIP domain-containing protein.	0.403
batf	Gata3.L	A0A1L8F9C6	A0A1L8GZI0	BZIP domain-containing protein.	Uncharacterized protein.	0.403
batf	gata3	A0A1L8F9C6	Q2TAR8	BZIP domain-containing protein.	XGATA-3 protein.	0.403
gata3	Batf.S	Q2TAR8	A0A1L8F0K4	XGATA-3 protein.	BZIP domain-containing protein.	0.403
gata3	batf	Q2TAR8	A0A1L8F9C6	XGATA-3 protein.	BZIP domain-containing protein.	0.403