29 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8H7W0	Uncharacterized protein. (645 aa)
	tnfsf11	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (290 aa)
	A0A1L8HAZ8	FAD-binding FR-type domain-containing protein. (583 aa)
	A0A1L8HFA5	Uncharacterized protein. (286 aa)
	Tnfsf11.L	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family. (290 aa)
	Efna2.S	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (198 aa)
	Efna2.L	Ephrin RBD domain-containing protein; Belongs to the ephrin family. (198 aa)
	Acp5.L	Tartrate-resistant acid phosphatase type 5. (326 aa)
	ctnnb1	Beta-catenin protein. (781 aa)
	snx10	MGC80910 protein. (205 aa)
	tpp1	MGC83094 protein. (566 aa)
	ctnnb1-2	Ctnnb1-prov protein. (781 aa)
	lrrk1	Uncharacterized protein. (2003 aa)
	wnt16-2	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (376 aa)
	wnt16	Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (376 aa)
	A0A1L8GQJ5	Uncharacterized protein. (161 aa)
	Lrp5.L	Uncharacterized protein. (1517 aa)
	lgr4	G_PROTEIN_RECEP_F1_2 domain-containing protein. (953 aa)
	Traf6.L	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (556 aa)
	Tph1.L	Uncharacterized protein. (481 aa)
	Traf6.S	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (556 aa)
	Lgr4.S	G_PROTEIN_RECEP_F1_2 domain-containing protein. (956 aa)
	cthrc1-2	Uncharacterized protein. (235 aa)
	cthrc1	Uncharacterized protein. (235 aa)
	Snx10.S	PX domain-containing protein. (205 aa)
	Epha2.L	Uncharacterized protein. (948 aa)
	G50	Uncharacterized protein. (980 aa)
	tgfb1-2	Transforming growth factor beta; Belongs to the TGF-beta family. (382 aa)
	tgfb1	Transforming growth factor beta; Belongs to the TGF-beta family. (382 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Acp5.L	Tnfsf11.L	A0A310UBJ0	A0A1L8HHK6	Tartrate-resistant acid phosphatase type 5.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.610
Acp5.L	tnfsf11	A0A310UBJ0	A0A1L8H9C6	Tartrate-resistant acid phosphatase type 5.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.610
Efna2.L	Epha2.L	A0A1L8HWH3	A0A1L8FPA0	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein.	0.989
Efna2.L	G50	A0A1L8HWH3	A0A1L8FHL6	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein.	0.944
Efna2.S	Epha2.L	A0A1L8HN71	A0A1L8FPA0	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein.	0.989
Efna2.S	G50	A0A1L8HN71	A0A1L8FHL6	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	Uncharacterized protein.	0.944
Epha2.L	Efna2.L	A0A1L8FPA0	A0A1L8HWH3	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.989
Epha2.L	Efna2.S	A0A1L8FPA0	A0A1L8HN71	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.989
Epha2.L	ctnnb1	A0A1L8FPA0	Q63ZT4	Uncharacterized protein.	Beta-catenin protein.	0.497
G50	Efna2.L	A0A1L8FHL6	A0A1L8HWH3	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.944
G50	Efna2.S	A0A1L8FHL6	A0A1L8HN71	Uncharacterized protein.	Ephrin RBD domain-containing protein; Belongs to the ephrin family.	0.944
Lgr4.S	Lrp5.L	A0A1L8GDQ5	A0A1L8GJX4	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Uncharacterized protein.	0.838
Lgr4.S	Tnfsf11.L	A0A1L8GDQ5	A0A1L8HHK6	G_PROTEIN_RECEP_F1_2 domain-containing protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.622
Lgr4.S	ctnnb1	A0A1L8GDQ5	Q63ZT4	G_PROTEIN_RECEP_F1_2 domain-containing protein.	Beta-catenin protein.	0.787
Lgr4.S	tnfsf11	A0A1L8GDQ5	A0A1L8H9C6	G_PROTEIN_RECEP_F1_2 domain-containing protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.622
Lrp5.L	Lgr4.S	A0A1L8GJX4	A0A1L8GDQ5	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.838
Lrp5.L	Tnfsf11.L	A0A1L8GJX4	A0A1L8HHK6	Uncharacterized protein.	TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.	0.568
Lrp5.L	ctnnb1	A0A1L8GJX4	Q63ZT4	Uncharacterized protein.	Beta-catenin protein.	0.974
Lrp5.L	ctnnb1-2	A0A1L8GJX4	Q7ZX35	Uncharacterized protein.	Ctnnb1-prov protein.	0.489
Lrp5.L	lgr4	A0A1L8GJX4	A0A1L8GJ26	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.838