56 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	MASP3b	Mannose-binding lectin-associated serine protease-3b; Belongs to the peptidase S1 family. (717 aa)
	3a	Mannose-binding lectin-associated serine protease-3a; Belongs to the peptidase S1 family. (717 aa)
	tnnc1	Cardiac troponin C. (161 aa)
	pdcd6	Pdcd6 protein. (187 aa)
	MGC68472	MGC68472 protein. (287 aa)
	anxa1.3	Annexin. (363 aa)
	alg2	Alg2-prov protein. (404 aa)
	stmn2-2	Stathmin; Belongs to the stathmin family. (178 aa)
	anxa1.1	Annexin. (343 aa)
	chp1	MGC83120 protein. (193 aa)
	anxa1.1-2	Annexin. (343 aa)
	tnnc2	MGC52923 protein. (161 aa)
	vps37b	Flj12750-prov protein. (281 aa)
	syt1	MGC86555 protein. (396 aa)
	A0A1L8EMB9	Uncharacterized protein. (293 aa)
	lrrc45	Uncharacterized protein. (679 aa)
	A0A1L8F0R1	C-type lectin domain-containing protein. (378 aa)
	nsmf	Uncharacterized protein. (498 aa)
	s100a10	S_100 domain-containing protein; Belongs to the S-100 family. (95 aa)
	A0A1L8F556	EF-hand domain-containing protein. (92 aa)
	Nsmf.L	Uncharacterized protein. (500 aa)
	Spaca9.L	Uncharacterized protein. (225 aa)
	A0A1L8FD70	EF-hand domain-containing protein. (92 aa)
	S100a10.S	Uncharacterized protein. (76 aa)
	s100a10-2	S_100 domain-containing protein; Belongs to the S-100 family. (136 aa)
	A0A1L8FD87	S_100 domain-containing protein. (95 aa)
	masp2	Uncharacterized protein; Belongs to the peptidase S1 family. (689 aa)
	masp2-2	CUB domain-containing protein. (183 aa)
	rbm22	Uncharacterized protein. (417 aa)
	stmn2	Stathmin; Belongs to the stathmin family. (178 aa)
	A0A1L8GD54	Uncharacterized protein. (399 aa)
	A0A1L8GE79	Uncharacterized protein. (394 aa)
	Tnnc1.L	Uncharacterized protein. (175 aa)
	Sntn.S	Uncharacterized protein. (88 aa)
	A0A1L8GI41	Uncharacterized protein. (351 aa)
	sntn	S_100 domain-containing protein. (116 aa)
	anxa6	Annexin. (674 aa)
	Anxa6.L	Annexin. (673 aa)
	A0A1L8H5T1	VPS37 C-terminal domain-containing protein. (429 aa)
	Slc9a1.S	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (774 aa)
	pef1	Uncharacterized protein. (278 aa)
	A0A1L8HDG6	VPS37 C-terminal domain-containing protein. (430 aa)
	slc9a1	Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. (773 aa)
	pef1-2	Uncharacterized protein. (283 aa)
	s100pbp	Uncharacterized protein. (560 aa)
	A0A1L8HHS5	Protein S100; Belongs to the S-100 family. (109 aa)
	wfs1	Uncharacterized protein. (863 aa)
	anxa3	Annexin. (323 aa)
	anxa1.2	Annexin. (338 aa)
	s100z	Protein S100; Belongs to the S-100 family. (99 aa)
	Wfs1.L	Uncharacterized protein. (860 aa)
	A0A1L8HVG1	Annexin. (304 aa)
	A0A1L8HY95	Annexin. (338 aa)
	A0A1L8HYC9	Annexin. (242 aa)
	s100z-2	Protein S100; Belongs to the S-100 family. (99 aa)
	pdcd6ip	LOC398095 protein. (872 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
3a	masp2	B7ZRP7	A0A1L8FF99	Mannose-binding lectin-associated serine protease-3a; Belongs to the peptidase S1 family.	Uncharacterized protein; Belongs to the peptidase S1 family.	0.847
3a	masp2-2	B7ZRP7	A0A1L8FKW9	Mannose-binding lectin-associated serine protease-3a; Belongs to the peptidase S1 family.	CUB domain-containing protein.	0.830
A0A1L8EMB9	Tnnc1.L	A0A1L8EMB9	A0A1L8GHI3	Uncharacterized protein.	Uncharacterized protein.	0.647
A0A1L8EMB9	tnnc1	A0A1L8EMB9	O12998	Uncharacterized protein.	Cardiac troponin C.	0.644
A0A1L8GE79	A0A1L8H5T1	A0A1L8GE79	A0A1L8H5T1	Uncharacterized protein.	VPS37 C-terminal domain-containing protein.	0.836
A0A1L8GE79	A0A1L8HDG6	A0A1L8GE79	A0A1L8HDG6	Uncharacterized protein.	VPS37 C-terminal domain-containing protein.	0.836
A0A1L8GE79	MGC68472	A0A1L8GE79	Q3KQB9	Uncharacterized protein.	MGC68472 protein.	0.979
A0A1L8GE79	pdcd6	A0A1L8GE79	Q2TAG5	Uncharacterized protein.	Pdcd6 protein.	0.479
A0A1L8GE79	pdcd6ip	A0A1L8GE79	B7ZQZ0	Uncharacterized protein.	LOC398095 protein.	0.941
A0A1L8GE79	pef1	A0A1L8GE79	A0A1L8H7X7	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A1L8GE79	pef1-2	A0A1L8GE79	A0A1L8HFK8	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A1L8GE79	vps37b	A0A1L8GE79	Q8AVK6	Uncharacterized protein.	Flj12750-prov protein.	0.979
A0A1L8GI41	A0A1L8H5T1	A0A1L8GI41	A0A1L8H5T1	Uncharacterized protein.	VPS37 C-terminal domain-containing protein.	0.836
A0A1L8GI41	A0A1L8HDG6	A0A1L8GI41	A0A1L8HDG6	Uncharacterized protein.	VPS37 C-terminal domain-containing protein.	0.836
A0A1L8GI41	MGC68472	A0A1L8GI41	Q3KQB9	Uncharacterized protein.	MGC68472 protein.	0.979
A0A1L8GI41	pdcd6	A0A1L8GI41	Q2TAG5	Uncharacterized protein.	Pdcd6 protein.	0.479
A0A1L8GI41	pdcd6ip	A0A1L8GI41	B7ZQZ0	Uncharacterized protein.	LOC398095 protein.	0.941
A0A1L8GI41	pef1	A0A1L8GI41	A0A1L8H7X7	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A1L8GI41	pef1-2	A0A1L8GI41	A0A1L8HFK8	Uncharacterized protein.	Uncharacterized protein.	0.479
A0A1L8GI41	vps37b	A0A1L8GI41	Q8AVK6	Uncharacterized protein.	Flj12750-prov protein.	0.979