10 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	inpp5a.1	IPPc domain-containing protein. (412 aa)
	ocrl	Rho-GAP domain-containing protein. (910 aa)
	ocrl-2	Rho-GAP domain-containing protein. (911 aa)
	inpp5d	SH2 domain-containing protein. (1099 aa)
	Inpp5d.L	SH2 domain-containing protein. (1111 aa)
	A0A1L8H274	IPPc domain-containing protein. (385 aa)
	inpp5k	IPPc domain-containing protein. (476 aa)
	A0A1L8HPX7	IPPc domain-containing protein. (772 aa)
	inpp5j	IPPc domain-containing protein. (784 aa)
	inpp5a.1-2	MGC83747 protein. (412 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8H274	A0A1L8HPX7	A0A1L8H274	A0A1L8HPX7	IPPc domain-containing protein.	IPPc domain-containing protein.	0.405
A0A1L8H274	inpp5j	A0A1L8H274	A0A1L8I0B9	IPPc domain-containing protein.	IPPc domain-containing protein.	0.405
A0A1L8H274	inpp5k	A0A1L8H274	A0A1L8HDR5	IPPc domain-containing protein.	IPPc domain-containing protein.	0.405
A0A1L8HPX7	A0A1L8H274	A0A1L8HPX7	A0A1L8H274	IPPc domain-containing protein.	IPPc domain-containing protein.	0.405
A0A1L8HPX7	inpp5a.1	A0A1L8HPX7	A0A1L8FJ28	IPPc domain-containing protein.	IPPc domain-containing protein.	0.937
A0A1L8HPX7	inpp5a.1-2	A0A1L8HPX7	Q66J03	IPPc domain-containing protein.	MGC83747 protein.	0.937
A0A1L8HPX7	inpp5j	A0A1L8HPX7	A0A1L8I0B9	IPPc domain-containing protein.	IPPc domain-containing protein.	0.901
A0A1L8HPX7	inpp5k	A0A1L8HPX7	A0A1L8HDR5	IPPc domain-containing protein.	IPPc domain-containing protein.	0.933
A0A1L8HPX7	ocrl	A0A1L8HPX7	A0A1L8F2V2	IPPc domain-containing protein.	Rho-GAP domain-containing protein.	0.425
A0A1L8HPX7	ocrl-2	A0A1L8HPX7	A0A1L8F7G5	IPPc domain-containing protein.	Rho-GAP domain-containing protein.	0.425
Inpp5d.L	ocrl	A0A1L8GB96	A0A1L8F2V2	SH2 domain-containing protein.	Rho-GAP domain-containing protein.	0.419
Inpp5d.L	ocrl-2	A0A1L8GB96	A0A1L8F7G5	SH2 domain-containing protein.	Rho-GAP domain-containing protein.	0.419
inpp5a.1	A0A1L8HPX7	A0A1L8FJ28	A0A1L8HPX7	IPPc domain-containing protein.	IPPc domain-containing protein.	0.937
inpp5a.1	inpp5a.1-2	A0A1L8FJ28	Q66J03	IPPc domain-containing protein.	MGC83747 protein.	0.900
inpp5a.1	inpp5j	A0A1L8FJ28	A0A1L8I0B9	IPPc domain-containing protein.	IPPc domain-containing protein.	0.937
inpp5a.1	inpp5k	A0A1L8FJ28	A0A1L8HDR5	IPPc domain-containing protein.	IPPc domain-containing protein.	0.937
inpp5a.1-2	A0A1L8HPX7	Q66J03	A0A1L8HPX7	MGC83747 protein.	IPPc domain-containing protein.	0.937
inpp5a.1-2	inpp5a.1	Q66J03	A0A1L8FJ28	MGC83747 protein.	IPPc domain-containing protein.	0.900
inpp5a.1-2	inpp5j	Q66J03	A0A1L8I0B9	MGC83747 protein.	IPPc domain-containing protein.	0.937
inpp5a.1-2	inpp5k	Q66J03	A0A1L8HDR5	MGC83747 protein.	IPPc domain-containing protein.	0.937