21 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8H7Y8	TGF_BETA_2 domain-containing protein. (566 aa)
	A0A1L8HFV1	TGF_BETA_2 domain-containing protein. (422 aa)
	gdf15	TGF_BETA_2 domain-containing protein. (377 aa)
	Gdf15.L	TGF_BETA_2 domain-containing protein. (371 aa)
	bmp4	Bone morphogenetic protein 4. (401 aa)
	bmp7.1-2	Osteogenic protein-1 homolog. (424 aa)
	bmp4-2	Bone morphogenetic protein 4. (400 aa)
	bmp7.1	TGF_BETA_2 domain-containing protein. (424 aa)
	Bmp6.S	TGF_BETA_2 domain-containing protein. (448 aa)
	Bmper.L	Uncharacterized protein. (687 aa)
	bmp6	TGF_BETA_2 domain-containing protein. (448 aa)
	bmp2	TGF_BETA_2 domain-containing protein. (398 aa)
	Bmp5.S	TGF_BETA_2 domain-containing protein. (449 aa)
	Bmp2.L	TGF_BETA_2 domain-containing protein. (398 aa)
	bmp5	TGF_BETA_2 domain-containing protein. (449 aa)
	cdh5	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (774 aa)
	cdh5-2	Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (775 aa)
	A0A1L8GT31	TGF_BETA_2 domain-containing protein. (426 aa)
	kiaa1324l	Uncharacterized protein. (996 aa)
	Kiaa1324l.L	Uncharacterized protein. (995 aa)
	Bmp7.2.L	TGF_BETA_2 domain-containing protein. (438 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8GT31	Bmp2.L	A0A1L8GT31	A0A1L8G5P4	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.556
A0A1L8GT31	bmp2	A0A1L8GT31	A0A1L8G1N2	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.554
A0A1L8GT31	bmp4	A0A1L8GT31	B7ZPR8	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 4.	0.538
A0A1L8GT31	bmp4-2	A0A1L8GT31	Q91703	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 4.	0.539
Bmp2.L	A0A1L8GT31	A0A1L8G5P4	A0A1L8GT31	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.556
Bmp2.L	Bmp5.S	A0A1L8G5P4	A0A1L8G3J1	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.532
Bmp2.L	Bmp6.S	A0A1L8G5P4	A0A1L8FS81	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.620
Bmp2.L	Bmp7.2.L	A0A1L8G5P4	A0A1L8H0A1	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.758
Bmp2.L	Bmper.L	A0A1L8G5P4	A0A1L8FWX0	TGF_BETA_2 domain-containing protein.	Uncharacterized protein.	0.706
Bmp2.L	bmp2	A0A1L8G5P4	A0A1L8G1N2	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.900
Bmp2.L	bmp5	A0A1L8G5P4	A0A1L8G9Z1	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.602
Bmp2.L	bmp6	A0A1L8G5P4	A0A1L8FXW8	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.620
Bmp2.L	bmp7.1	A0A1L8G5P4	A0A1L8ELF4	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.745
Bmp2.L	bmp7.1-2	A0A1L8G5P4	Q9YGH7	TGF_BETA_2 domain-containing protein.	Osteogenic protein-1 homolog.	0.745
Bmp5.S	Bmp2.L	A0A1L8G3J1	A0A1L8G5P4	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.532
Bmp5.S	bmp2	A0A1L8G3J1	A0A1L8G1N2	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.532
Bmp5.S	bmp4	A0A1L8G3J1	B7ZPR8	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 4.	0.521
Bmp5.S	bmp4-2	A0A1L8G3J1	Q91703	TGF_BETA_2 domain-containing protein.	Bone morphogenetic protein 4.	0.521
Bmp5.S	bmp5	A0A1L8G3J1	A0A1L8G9Z1	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.900
Bmp6.S	Bmp2.L	A0A1L8FS81	A0A1L8G5P4	TGF_BETA_2 domain-containing protein.	TGF_BETA_2 domain-containing protein.	0.620