29 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8EUA6	Uncharacterized protein. (3827 aa)
	A0A1L8EUA7	PKD domain-containing protein. (501 aa)
	fbf1	Uncharacterized protein. (1102 aa)
	pkd1	Uncharacterized protein. (4353 aa)
	A0A1L8F270	FERM domain-containing protein. (580 aa)
	Arf6.S	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (215 aa)
	A0A1L8F921	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	ttc8	TPR_REGION domain-containing protein. (505 aa)
	A0A1L8FGA0	Uncharacterized protein. (191 aa)
	pard3	Uncharacterized protein. (1369 aa)
	pard3-2	Uncharacterized protein. (1332 aa)
	A0A1L8G0X2	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1043 aa)
	Ptk7.L	Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1043 aa)
	Sh3bp1.S	Uncharacterized protein. (551 aa)
	frmd4b	FERM domain-containing protein. (971 aa)
	sh3bp1	Uncharacterized protein. (636 aa)
	frmd4b-2	FERM domain-containing protein. (967 aa)
	A0A1L8GTB8	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2543 aa)
	A0A1L8GTU7	FERM domain-containing protein. (856 aa)
	arf6.2	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	frmd4a	FERM domain-containing protein. (1094 aa)
	Myosin-9a	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (2578 aa)
	ift20	Uncharacterized protein. (132 aa)
	A0A1L8HLB9	Uncharacterized protein. (4670 aa)
	Golph3.S	Uncharacterized protein. (290 aa)
	A0A1L8HU09	Uncharacterized protein. (1875 aa)
	ift20-2	Intraflagellar transport protein 20. (132 aa)
	Arf6	Arf6 protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	golph3	LOC495055 protein. (288 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EUA6	ift20	A0A1L8EUA6	A0A1L8H621	Uncharacterized protein.	Uncharacterized protein.	0.652
A0A1L8EUA6	ift20-2	A0A1L8EUA6	B7ZQ18	Uncharacterized protein.	Intraflagellar transport protein 20.	0.654
A0A1L8F270	A0A1L8FGA0	A0A1L8F270	A0A1L8FGA0	FERM domain-containing protein.	Uncharacterized protein.	0.673
A0A1L8F921	A0A1L8GTB8	A0A1L8F921	A0A1L8GTB8	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.550
A0A1L8F921	Myosin-9a	A0A1L8F921	A0A1L8GZW9	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.550
A0A1L8FGA0	A0A1L8F270	A0A1L8FGA0	A0A1L8F270	Uncharacterized protein.	FERM domain-containing protein.	0.673
A0A1L8FGA0	A0A1L8GTB8	A0A1L8FGA0	A0A1L8GTB8	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.786
A0A1L8FGA0	Myosin-9a	A0A1L8FGA0	A0A1L8GZW9	Uncharacterized protein.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.786
A0A1L8FGA0	Sh3bp1.S	A0A1L8FGA0	A0A1L8GH57	Uncharacterized protein.	Uncharacterized protein.	0.498
A0A1L8FGA0	pard3	A0A1L8FGA0	A0A1L8FQM3	Uncharacterized protein.	Uncharacterized protein.	0.619
A0A1L8FGA0	pard3-2	A0A1L8FGA0	A0A1L8FVE8	Uncharacterized protein.	Uncharacterized protein.	0.619
A0A1L8FGA0	sh3bp1	A0A1L8FGA0	A0A1L8GP19	Uncharacterized protein.	Uncharacterized protein.	0.498
A0A1L8GTB8	A0A1L8F921	A0A1L8GTB8	A0A1L8F921	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.550
A0A1L8GTB8	A0A1L8FGA0	A0A1L8GTB8	A0A1L8FGA0	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein.	0.786
A0A1L8GTB8	Arf6	A0A1L8GTB8	Q5EAX8	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	0.550
A0A1L8GTB8	Arf6.S	A0A1L8GTB8	A0A1L8F420	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.550
A0A1L8GTB8	arf6.2	A0A1L8GTB8	Q6DE46	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.	0.550
Arf6	A0A1L8GTB8	Q5EAX8	A0A1L8GTB8	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.550
Arf6	Myosin-9a	Q5EAX8	A0A1L8GZW9	Arf6 protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.550
Arf6.S	A0A1L8GTB8	A0A1L8F420	A0A1L8GTB8	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.	0.550