(30 nodes) Sperm midpiece network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Slc26a6	STAS domain-containing protein. (735 aa)
	A0A1L8EVN1	Uncharacterized protein. (1799 aa)
	Nme9.L	Uncharacterized protein; Belongs to the NDK family. (625 aa)
	A0A1L8FDQ4	Uncharacterized protein. (127 aa)
	A0A1L8FI05	Uncharacterized protein. (778 aa)
	A0A1L8FI74	Uncharacterized protein. (256 aa)
	A0A1L8FQV3	Uncharacterized protein. (935 aa)
	gtpbp10	Uncharacterized protein. (896 aa)
	A0A1L8G2D3	Uncharacterized protein. (45 aa)
	pacrg	Uncharacterized protein. (240 aa)
	A0A1L8G8I5	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (296 aa)
	ift172	Uncharacterized protein. (1749 aa)
	A0A1L8GHL0	Rhodopsin. (354 aa)
	Rho.L	Rhodopsin. (459 aa)
	Opsin	Rhodopsin. (403 aa)
	A0A1L8GPX5	STAS domain-containing protein. (747 aa)
	A0A1L8GS90	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (406 aa)
	A0A1L8GTW5	Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (773 aa)
	A0A1L8GTX3	Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (690 aa)
	A0A1L8GTY6	Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (756 aa)
	A0A1L8GZ46	Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (738 aa)
	A0A1L8GZ53	Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (775 aa)
	A0A1L8GZB4	Chloride anion exchanger; Chloride/bicarbonate exchanger. Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (757 aa)
	A0A1L8H1C8	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (406 aa)
	tacr3	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (431 aa)
	ift81	IFT81_CH domain-containing protein. (674 aa)
	tacr3-2	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (431 aa)
	ift81-2	IFT81_CH domain-containing protein. (674 aa)
	Spef2.L	Calponin-homology (CH) domain-containing protein. (1806 aa)
	sqstm1	MGC64432 protein. (454 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8G2D3	Nme9.L	A0A1L8G2D3	A0A1L8EWQ5	Uncharacterized protein.	Uncharacterized protein; Belongs to the NDK family.	0.414
A0A1L8GHL0	Opsin	A0A1L8GHL0	A0A1L8GPM0	Rhodopsin.	Rhodopsin.	0.900
A0A1L8GHL0	Rho.L	A0A1L8GHL0	A0A1L8GPJ9	Rhodopsin.	Rhodopsin.	0.901
A0A1L8GS90	A0A1L8H1C8	A0A1L8GS90	A0A1L8H1C8	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.900
A0A1L8H1C8	A0A1L8GS90	A0A1L8H1C8	A0A1L8GS90	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.900
Nme9.L	A0A1L8G2D3	A0A1L8EWQ5	A0A1L8G2D3	Uncharacterized protein; Belongs to the NDK family.	Uncharacterized protein.	0.414
Nme9.L	pacrg	A0A1L8EWQ5	A0A1L8G895	Uncharacterized protein; Belongs to the NDK family.	Uncharacterized protein.	0.414
Opsin	A0A1L8GHL0	A0A1L8GPM0	A0A1L8GHL0	Rhodopsin.	Rhodopsin.	0.900
Opsin	Rho.L	A0A1L8GPM0	A0A1L8GPJ9	Rhodopsin.	Rhodopsin.	0.901
Rho.L	A0A1L8GHL0	A0A1L8GPJ9	A0A1L8GHL0	Rhodopsin.	Rhodopsin.	0.901
Rho.L	Opsin	A0A1L8GPJ9	A0A1L8GPM0	Rhodopsin.	Rhodopsin.	0.901
ift172	ift81	A0A1L8GCV5	A0A1L8HQQ1	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.998
ift172	ift81-2	A0A1L8GCV5	A0A1L8I137	Uncharacterized protein.	IFT81_CH domain-containing protein.	0.998
ift81	ift172	A0A1L8HQQ1	A0A1L8GCV5	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.998
ift81-2	ift172	A0A1L8I137	A0A1L8GCV5	IFT81_CH domain-containing protein.	Uncharacterized protein.	0.998
pacrg	Nme9.L	A0A1L8G895	A0A1L8EWQ5	Uncharacterized protein.	Uncharacterized protein; Belongs to the NDK family.	0.414
tacr3	tacr3-2	A0A1L8HM58	A0A1L8HUZ1	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.900
tacr3-2	tacr3	A0A1L8HUZ1	A0A1L8HM58	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.	0.900