29 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	slc32a1	Aa_trans domain-containing protein. (518 aa)
	tmem163	Uncharacterized protein. (278 aa)
	A0A1L8ER89	Uncharacterized protein. (201 aa)
	stx16-2	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (308 aa)
	stx16	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (323 aa)
	tmem163-2	Uncharacterized protein. (281 aa)
	A0A1L8EYZ7	Uncharacterized protein. (201 aa)
	atp6v1g2	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (119 aa)
	atp6v1g2-2	V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells. (119 aa)
	A0A1L8FDI1	Uncharacterized protein. (261 aa)
	slc17a7	MFS domain-containing protein. (576 aa)
	Slc17a7.L	MFS domain-containing protein. (576 aa)
	slc30a3	Uncharacterized protein. (395 aa)
	A0A1L8GDV5	Uncharacterized protein. (519 aa)
	A0A1L8GE98	MFS domain-containing protein. (582 aa)
	A0A1L8GG53	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (334 aa)
	A0A1L8GIH3	MFS domain-containing protein. (454 aa)
	A0A1L8GIZ8	Uncharacterized protein. (509 aa)
	A0A1L8GMR0	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (256 aa)
	lman1l	Uncharacterized protein. (158 aa)
	A0A1L8GUW3	MFS domain-containing protein. (586 aa)
	A0A1L8GY24	MFS domain-containing protein. (584 aa)
	lman1l-2	Uncharacterized protein. (158 aa)
	A0A1L8H3A0	t-SNARE coiled-coil homology domain-containing protein. (322 aa)
	wfs1	Uncharacterized protein. (863 aa)
	gabra2	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (512 aa)
	Wfs1.L	Uncharacterized protein. (860 aa)
	rab35l	Uncharacterized protein. (201 aa)
	A0A310TN42	Uncharacterized protein. (147 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ER89	A0A1L8EYZ7	A0A1L8ER89	A0A1L8EYZ7	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8ER89	rab35l	A0A1L8ER89	A0A1L8I076	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A1L8EYZ7	A0A1L8ER89	A0A1L8EYZ7	A0A1L8ER89	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8EYZ7	rab35l	A0A1L8EYZ7	A0A1L8I076	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A1L8GE98	A0A310TN42	A0A1L8GE98	A0A310TN42	MFS domain-containing protein.	Uncharacterized protein.	0.503
A0A1L8GE98	Slc17a7.L	A0A1L8GE98	A0A1L8FNF7	MFS domain-containing protein.	MFS domain-containing protein.	0.443
A0A1L8GE98	slc17a7	A0A1L8GE98	A0A1L8FH30	MFS domain-containing protein.	MFS domain-containing protein.	0.438
A0A1L8GE98	slc32a1	A0A1L8GE98	A0A1L8EMI6	MFS domain-containing protein.	Aa_trans domain-containing protein.	0.503
A0A1L8GG53	stx16	A0A1L8GG53	A0A1L8ELR8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.931
A0A1L8GG53	stx16-2	A0A1L8GG53	A0A1L8ESZ6	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.931
A0A1L8GIH3	A0A310TN42	A0A1L8GIH3	A0A310TN42	MFS domain-containing protein.	Uncharacterized protein.	0.503
A0A1L8GIH3	Slc17a7.L	A0A1L8GIH3	A0A1L8FNF7	MFS domain-containing protein.	MFS domain-containing protein.	0.439
A0A1L8GIH3	slc17a7	A0A1L8GIH3	A0A1L8FH30	MFS domain-containing protein.	MFS domain-containing protein.	0.439
A0A1L8GIH3	slc32a1	A0A1L8GIH3	A0A1L8EMI6	MFS domain-containing protein.	Aa_trans domain-containing protein.	0.503
A0A1L8GMR0	stx16	A0A1L8GMR0	A0A1L8ELR8	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.931
A0A1L8GMR0	stx16-2	A0A1L8GMR0	A0A1L8ESZ6	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.931
A0A1L8H3A0	stx16	A0A1L8H3A0	A0A1L8ELR8	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.931
A0A1L8H3A0	stx16-2	A0A1L8H3A0	A0A1L8ESZ6	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.931
A0A310TN42	A0A1L8GE98	A0A310TN42	A0A1L8GE98	Uncharacterized protein.	MFS domain-containing protein.	0.503
A0A310TN42	A0A1L8GIH3	A0A310TN42	A0A1L8GIH3	Uncharacterized protein.	MFS domain-containing protein.	0.503