55 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	sqstm1	MGC64432 protein. (454 aa)
	rhog	MGC68933 protein. (191 aa)
	arf6.2	ADP ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	itga3	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1032 aa)
	stac2	Uncharacterized protein. (408 aa)
	gper1	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (361 aa)
	R3hdm1.S	Uncharacterized protein. (1088 aa)
	A0A310TMX6	Uncharacterized protein. (147 aa)
	tnf-2	Tumor necrosis factor alpha. (225 aa)
	Arf6	Arf6 protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	cib1	LOC496348 protein. (190 aa)
	cib1-2	LOC495358 protein. (190 aa)
	ezr	MGC82058 protein. (582 aa)
	arhgef16	Uncharacterized protein. (708 aa)
	A0A1L8FAC9	Galectin. (156 aa)
	A0A1L8FA44	WSK domain-containing protein. (510 aa)
	A0A1L8F9R9	Galectin. (138 aa)
	A0A1L8F921	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	A0A1L8F919	Uncharacterized protein. (534 aa)
	rhogl.1-2	Uncharacterized protein. (191 aa)
	A0A1L8F6E0	WD_REPEATS_REGION domain-containing protein. (165 aa)
	Arf6.S	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (215 aa)
	clip3	Uncharacterized protein. (534 aa)
	tnf	TNF_2 domain-containing protein. (227 aa)
	rack1	WD_REPEATS_REGION domain-containing protein. (276 aa)
	rhogl.1	Uncharacterized protein. (191 aa)
	Wnk3.S	Protein kinase domain-containing protein. (2749 aa)
	A0A1L8EZY7	WSK domain-containing protein. (503 aa)
	Lgals3.S	Galectin. (304 aa)
	A0A1L8EVJ9	Uncharacterized protein. (1014 aa)
	gper1-2	G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family. (372 aa)
	itga3-2	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family. (1027 aa)
	stac2-2	Uncharacterized protein. (405 aa)
	A0A1L8HI36	Uncharacterized protein. (891 aa)
	stac3-2	Uncharacterized protein. (338 aa)
	A0A1L8HHR6	Uncharacterized protein. (174 aa)
	A0A1L8HBF6	Uncharacterized protein. (191 aa)
	A0A1L8H9Z1	Uncharacterized protein. (875 aa)
	stac3	Uncharacterized protein. (338 aa)
	A0A1L8H700	Calcium-transporting ATPase; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium. (1209 aa)
	rangrf	Uncharacterized protein. (259 aa)
	A0A1L8GNL6	ATP_Ca_trans_C domain-containing protein. (180 aa)
	acsl3-2	Uncharacterized protein. (709 aa)
	A0A1L8GAZ8	Uncharacterized protein. (624 aa)
	Cnst.L	Consortin_C domain-containing protein. (687 aa)
	acsl3	AMP-binding domain-containing protein. (803 aa)
	A0A1L8G4C9	Uncharacterized protein. (623 aa)
	cnst	Consortin_C domain-containing protein. (695 aa)
	stac	Uncharacterized protein. (405 aa)
	ramp3	Uncharacterized protein. (147 aa)
	Epha2.L	Uncharacterized protein. (948 aa)
	G50	Uncharacterized protein. (980 aa)
	arhgef16-2	Uncharacterized protein. (714 aa)
	rack1-2	Gnb2l1-prov protein. (317 aa)
	lgals3	Galectin. (261 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8G4C9	ezr	A0A1L8G4C9	Q6AX84	Uncharacterized protein.	MGC82058 protein.	0.678
A0A1L8G4C9	stac	A0A1L8G4C9	A0A1L8FWS8	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A1L8G4C9	stac2	A0A1L8G4C9	A0A1L8EKT6	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A1L8G4C9	stac2-2	A0A1L8G4C9	A0A1L8ERZ7	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A1L8GAZ8	ezr	A0A1L8GAZ8	Q6AX84	Uncharacterized protein.	MGC82058 protein.	0.678
A0A1L8GAZ8	stac	A0A1L8GAZ8	A0A1L8FWS8	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A1L8GAZ8	stac2	A0A1L8GAZ8	A0A1L8EKT6	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A1L8GAZ8	stac2-2	A0A1L8GAZ8	A0A1L8ERZ7	Uncharacterized protein.	Uncharacterized protein.	0.424
A0A1L8HBF6	Epha2.L	A0A1L8HBF6	A0A1L8FPA0	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A1L8HBF6	G50	A0A1L8HBF6	A0A1L8FHL6	Uncharacterized protein.	Uncharacterized protein.	0.491
A0A1L8HBF6	arhgef16	A0A1L8HBF6	A0A1L8FGJ3	Uncharacterized protein.	Uncharacterized protein.	0.435
A0A1L8HBF6	arhgef16-2	A0A1L8HBF6	A0A1L8FMK2	Uncharacterized protein.	Uncharacterized protein.	0.435
Epha2.L	A0A1L8HBF6	A0A1L8FPA0	A0A1L8HBF6	Uncharacterized protein.	Uncharacterized protein.	0.491
Epha2.L	itga3	A0A1L8FPA0	A0A1L8EKX9	Uncharacterized protein.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.432
Epha2.L	itga3-2	A0A1L8FPA0	A0A1L8ES67	Uncharacterized protein.	Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.	0.434
Epha2.L	rhog	A0A1L8FPA0	Q6PCJ6	Uncharacterized protein.	MGC68933 protein.	0.666
Epha2.L	rhogl.1	A0A1L8FPA0	A0A1L8F2C9	Uncharacterized protein.	Uncharacterized protein.	0.491
Epha2.L	rhogl.1-2	A0A1L8FPA0	A0A1L8F700	Uncharacterized protein.	Uncharacterized protein.	0.491
G50	A0A1L8HBF6	A0A1L8FHL6	A0A1L8HBF6	Uncharacterized protein.	Uncharacterized protein.	0.491
G50	rhog	A0A1L8FHL6	Q6PCJ6	Uncharacterized protein.	MGC68933 protein.	0.491