46 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8HLK0	Uncharacterized protein. (1639 aa)
	ube3a-2	Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. (908 aa)
	rapgef1	MGC80732 protein. (1035 aa)
	stmn2-2	Stathmin; Belongs to the stathmin family. (178 aa)
	bdnf-2	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (247 aa)
	cib1-2	LOC495358 protein. (190 aa)
	cib1	LOC496348 protein. (190 aa)
	rab35l	Uncharacterized protein. (201 aa)
	Ntrk2.S	Tyrosine-protein kinase receptor. (821 aa)
	Rapgef2.L	Uncharacterized protein. (1647 aa)
	ntrk2	Tyrosine-protein kinase receptor. (807 aa)
	ube3a	Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates. (908 aa)
	Ngf.L	NGF domain-containing protein; Belongs to the NGF-beta family. (232 aa)
	Sort1.S	Sortilin. (801 aa)
	ngf	NGF domain-containing protein; Belongs to the NGF-beta family. (242 aa)
	A0A1L8H0X6	Tyrosine-protein kinase receptor. (825 aa)
	usp8-2	Uncharacterized protein; Belongs to the peptidase C19 family. (1063 aa)
	A0A1L8GZA6	Uncharacterized protein. (1121 aa)
	Magi2.L	PDZ domain-containing protein. (104 aa)
	ntf3-2	Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (274 aa)
	A0A1L8GTX5	PDZ domain-containing protein. (99 aa)
	Magi2.S	Uncharacterized protein. (1117 aa)
	usp8	Uncharacterized protein; Belongs to the peptidase C19 family. (1060 aa)
	A0A1L8GSP0	Tyrosine-protein kinase receptor. (296 aa)
	A0A1L8GSK4	Ig-like domain-containing protein. (306 aa)
	ntf3	Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family. (274 aa)
	bdnf	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (247 aa)
	kidins220-2	ANK_REP_REGION domain-containing protein. (1746 aa)
	wasf1-2	WH2 domain-containing protein. (553 aa)
	kidins220	ANK_REP_REGION domain-containing protein. (1742 aa)
	wasf1	WH2 domain-containing protein. (561 aa)
	stmn2	Stathmin; Belongs to the stathmin family. (178 aa)
	A0A1L8FWI3	Uncharacterized protein. (424 aa)
	A0A1L8FRN8	Uncharacterized protein. (428 aa)
	A0A1L8FNJ3	NGF domain-containing protein; Belongs to the NGF-beta family. (236 aa)
	A0A1L8FC93	Tyrosine-protein kinase receptor. (804 aa)
	A0A1L8F8C1	KAP NTPase domain-containing protein. (662 aa)
	Nkpd1.L	KAP NTPase domain-containing protein. (725 aa)
	Rapgef1.L	N-terminal Ras-GEF domain-containing protein. (157 aa)
	A0A1L8F4K5	Tyrosine-protein kinase receptor. (864 aa)
	Nkpd1.S	KAP NTPase domain-containing protein. (729 aa)
	A0A1L8EYZ7	Uncharacterized protein. (201 aa)
	A0A1L8EY00	Eukaryotic elongation factor 2 kinase. (718 aa)
	A0A1L8ER89	Uncharacterized protein. (201 aa)
	A0A1L8EQI2	Eukaryotic elongation factor 2 kinase. (741 aa)
	A0A1L8EKE1	NGF domain-containing protein; Belongs to the NGF-beta family. (202 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EKE1	A0A1L8F4K5	A0A1L8EKE1	A0A1L8F4K5	NGF domain-containing protein; Belongs to the NGF-beta family.	Tyrosine-protein kinase receptor.	0.897
A0A1L8EKE1	A0A1L8FC93	A0A1L8EKE1	A0A1L8FC93	NGF domain-containing protein; Belongs to the NGF-beta family.	Tyrosine-protein kinase receptor.	0.897
A0A1L8EKE1	A0A1L8GSK4	A0A1L8EKE1	A0A1L8GSK4	NGF domain-containing protein; Belongs to the NGF-beta family.	Ig-like domain-containing protein.	0.794
A0A1L8EKE1	A0A1L8GSP0	A0A1L8EKE1	A0A1L8GSP0	NGF domain-containing protein; Belongs to the NGF-beta family.	Tyrosine-protein kinase receptor.	0.704
A0A1L8EKE1	A0A1L8H0X6	A0A1L8EKE1	A0A1L8H0X6	NGF domain-containing protein; Belongs to the NGF-beta family.	Tyrosine-protein kinase receptor.	0.794
A0A1L8EKE1	Ntrk2.S	A0A1L8EKE1	A0A1L8HZ01	NGF domain-containing protein; Belongs to the NGF-beta family.	Tyrosine-protein kinase receptor.	0.999
A0A1L8EKE1	Sort1.S	A0A1L8EKE1	A0A1L8H727	NGF domain-containing protein; Belongs to the NGF-beta family.	Sortilin.	0.668
A0A1L8EKE1	bdnf	A0A1L8EKE1	A0A1L8GDT3	NGF domain-containing protein; Belongs to the NGF-beta family.	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.	0.944
A0A1L8EKE1	bdnf-2	A0A1L8EKE1	Q63ZM5	NGF domain-containing protein; Belongs to the NGF-beta family.	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.	0.943
A0A1L8EKE1	ntf3	A0A1L8EKE1	A0A1L8GQU7	NGF domain-containing protein; Belongs to the NGF-beta family.	Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.	0.504
A0A1L8EKE1	ntf3-2	A0A1L8EKE1	A0A1L8GWP4	NGF domain-containing protein; Belongs to the NGF-beta family.	Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.	0.502
A0A1L8EKE1	ntrk2	A0A1L8EKE1	A0A1L8HPC8	NGF domain-containing protein; Belongs to the NGF-beta family.	Tyrosine-protein kinase receptor.	0.999
A0A1L8ER89	A0A1L8EYZ7	A0A1L8ER89	A0A1L8EYZ7	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8ER89	rab35l	A0A1L8ER89	A0A1L8I076	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A1L8EYZ7	A0A1L8ER89	A0A1L8EYZ7	A0A1L8ER89	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8EYZ7	rab35l	A0A1L8EYZ7	A0A1L8I076	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A1L8F4K5	A0A1L8EKE1	A0A1L8F4K5	A0A1L8EKE1	Tyrosine-protein kinase receptor.	NGF domain-containing protein; Belongs to the NGF-beta family.	0.897
A0A1L8F4K5	A0A1L8FC93	A0A1L8F4K5	A0A1L8FC93	Tyrosine-protein kinase receptor.	Tyrosine-protein kinase receptor.	0.900
A0A1L8F4K5	A0A1L8FNJ3	A0A1L8F4K5	A0A1L8FNJ3	Tyrosine-protein kinase receptor.	NGF domain-containing protein; Belongs to the NGF-beta family.	0.897
A0A1L8F4K5	Ngf.L	A0A1L8F4K5	A0A1L8HE07	Tyrosine-protein kinase receptor.	NGF domain-containing protein; Belongs to the NGF-beta family.	0.936