37 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	epb41l5	FERM domain-containing protein. (752 aa)
	snap25	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (206 aa)
	slc2a1	LOC494763 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (491 aa)
	Nyx.L	LRRCT domain-containing protein. (470 aa)
	Epb41l4a.S	FERM domain-containing protein. (714 aa)
	A0A1L8HVE1	Serine/threonine-protein phosphatase with EF-hands. (756 aa)
	Epb41l4a.L	FERM domain-containing protein. (733 aa)
	ush1g	ANK_REP_REGION domain-containing protein. (465 aa)
	A0A1L8EN80	Uncharacterized protein. (202 aa)
	ppef1	Serine/threonine-protein phosphatase with EF-hands. (702 aa)
	Nyx.S	LRRCT domain-containing protein. (471 aa)
	A0A1L8ENN6	FERM domain-containing protein. (751 aa)
	Slc2a4.L	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (509 aa)
	opn1sw	G_PROTEIN_RECEP_F1_2 domain-containing protein. (347 aa)
	Opsin	Rhodopsin. (403 aa)
	Rho.L	Rhodopsin. (459 aa)
	Gnat	Uncharacterized protein. (350 aa)
	Gnat1.S	Uncharacterized protein. (350 aa)
	A0A1L8GDM9	Uncharacterized protein. (198 aa)
	A0A1L8G9Q3	Uncharacterized protein. (314 aa)
	usp45	Ubiquitin carboxyl-terminal hydrolase. (806 aa)
	C2orf71.L	Uncharacterized protein. (1310 aa)
	rd3-2	Uncharacterized protein. (197 aa)
	snap25-2	Synaptosomal-associated protein; Belongs to the SNAP-25 family. (206 aa)
	atp1a3	Sodium/potassium-transporting ATPase subunit alpha. (1025 aa)
	LOC100485989.S	Green rod opsin. (362 aa)
	rd3	Uncharacterized protein. (197 aa)
	C2orf71.S	Uncharacterized protein. (1262 aa)
	C8orf37.L	Uncharacterized protein. (199 aa)
	guk1	Guanylate kinase-like domain-containing protein. (213 aa)
	Guk1.S	Guanylate kinase-like domain-containing protein. (213 aa)
	A0A1L8FHH3	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (491 aa)
	A0A1L8EUU9	Uncharacterized protein. (202 aa)
	A0A1L8EUD3	ANK_REP_REGION domain-containing protein. (615 aa)
	rcvrn.2	MGC84117 protein. (192 aa)
	rcvrn.2-2	MGC84424 protein. (192 aa)
	gnat2	MGC84412 protein. (354 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EN80	Gnat	A0A1L8EN80	A0A1L8GP75	Uncharacterized protein.	Uncharacterized protein.	0.587
A0A1L8EN80	Gnat1.S	A0A1L8EN80	A0A1L8GHB3	Uncharacterized protein.	Uncharacterized protein.	0.402
A0A1L8EN80	Opsin	A0A1L8EN80	A0A1L8GPM0	Uncharacterized protein.	Rhodopsin.	0.957
A0A1L8EN80	Rho.L	A0A1L8EN80	A0A1L8GPJ9	Uncharacterized protein.	Rhodopsin.	0.934
A0A1L8EN80	opn1sw	A0A1L8EN80	A0A1L8GZN9	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.636
A0A1L8EUU9	Gnat	A0A1L8EUU9	A0A1L8GP75	Uncharacterized protein.	Uncharacterized protein.	0.587
A0A1L8EUU9	Gnat1.S	A0A1L8EUU9	A0A1L8GHB3	Uncharacterized protein.	Uncharacterized protein.	0.403
A0A1L8EUU9	Opsin	A0A1L8EUU9	A0A1L8GPM0	Uncharacterized protein.	Rhodopsin.	0.957
A0A1L8EUU9	Rho.L	A0A1L8EUU9	A0A1L8GPJ9	Uncharacterized protein.	Rhodopsin.	0.933
A0A1L8EUU9	opn1sw	A0A1L8EUU9	A0A1L8GZN9	Uncharacterized protein.	G_PROTEIN_RECEP_F1_2 domain-containing protein.	0.636
A0A1L8FHH3	Slc2a4.L	A0A1L8FHH3	A0A1L8H4N2	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	0.901
A0A1L8FHH3	slc2a1	A0A1L8FHH3	Q63ZP5	MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	LOC494763 protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.	0.900
A0A1L8HVE1	Opsin	A0A1L8HVE1	A0A1L8GPM0	Serine/threonine-protein phosphatase with EF-hands.	Rhodopsin.	0.665
A0A1L8HVE1	Rho.L	A0A1L8HVE1	A0A1L8GPJ9	Serine/threonine-protein phosphatase with EF-hands.	Rhodopsin.	0.665
C2orf71.L	Opsin	A0A1L8G6R9	A0A1L8GPM0	Uncharacterized protein.	Rhodopsin.	0.432
C2orf71.L	Rho.L	A0A1L8G6R9	A0A1L8GPJ9	Uncharacterized protein.	Rhodopsin.	0.432
C2orf71.S	Opsin	A0A1L8G0X6	A0A1L8GPM0	Uncharacterized protein.	Rhodopsin.	0.432
C2orf71.S	Rho.L	A0A1L8G0X6	A0A1L8GPJ9	Uncharacterized protein.	Rhodopsin.	0.432
Gnat	A0A1L8EN80	A0A1L8GP75	A0A1L8EN80	Uncharacterized protein.	Uncharacterized protein.	0.587
Gnat	A0A1L8EUU9	A0A1L8GP75	A0A1L8EUU9	Uncharacterized protein.	Uncharacterized protein.	0.587