(40 nodes) Cytosolic small ribosomal subunit network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rps5	MGC64490 protein; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	rps14	Rps14-prov protein; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	rps18	MGC82306 protein; Belongs to the universal ribosomal protein uS13 family. (152 aa)
	MGC82136	MGC82136 protein. (119 aa)
	rps25	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (125 aa)
	rps23	MGC86316 protein; Belongs to the universal ribosomal protein uS12 family. (143 aa)
	rps26-2	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	rps28p9	MGC85550 protein. (69 aa)
	fau-2	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	rps16	Rps16 protein; Belongs to the universal ribosomal protein uS9 family. (146 aa)
	Rps19.S	Uncharacterized protein. (191 aa)
	dhx29	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily. (1364 aa)
	rps15	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (155 aa)
	rps26	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (115 aa)
	A0A1L8H046	Uncharacterized protein. (138 aa)
	A0A1L8GUP1	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family. (151 aa)
	Rps17.S	Uncharacterized protein. (170 aa)
	rpsa	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (306 aa)
	A0A1L8GJ00	S5 DRBM domain-containing protein. (171 aa)
	rps13	Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	fau	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. (133 aa)
	A0A1L8GBF9	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (246 aa)
	A0A1L8G5I7	Uncharacterized protein. (155 aa)
	Rps7	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (219 aa)
	rps20	Ribosomal_S10 domain-containing protein. (119 aa)
	A0A1L8FNR9	Uncharacterized protein. (145 aa)
	A0A1L8F9R5	Uncharacterized protein. (77 aa)
	A0A1L8F8E2	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (203 aa)
	mcts1-2	Malignant T-cell-amplified sequence. (181 aa)
	mcts1	Malignant T-cell-amplified sequence. (181 aa)
	Rps29.S	Uncharacterized protein. (86 aa)
	A0A1L8EQX4	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (281 aa)
	A0A1L8END4	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family. (155 aa)
	A0A1L8EJW9	Ribosomal_S17_N domain-containing protein. (114 aa)
	A0A1L8EJU1	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (141 aa)
	A0A1L8EJP8	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (79 aa)
	rpsa-2	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. Also functions as a cell surface receptor for laminin. Plays a role in cell adhesion to the basement membrane and in the consequent activation of signaling transduction pathways. May play a role in cell fate determination and tissue morphogenesis. Belongs to the universal ribosomal protein uS2 family. (306 aa)
	rps2	Rps2e protein; Belongs to the universal ribosomal protein uS5 family. (281 aa)
	rps13-2	Rps13-prov protein; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	rps11	Rps11 protein; Belongs to the universal ribosomal protein uS17 family. (158 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EJP8	A0A1L8EJU1	A0A1L8EJP8	A0A1L8EJU1	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.	0.999
A0A1L8EJP8	A0A1L8EJW9	A0A1L8EJP8	A0A1L8EJW9	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Ribosomal_S17_N domain-containing protein.	0.998
A0A1L8EJP8	A0A1L8END4	A0A1L8EJP8	A0A1L8END4	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.	0.998
A0A1L8EJP8	A0A1L8EQX4	A0A1L8EJP8	A0A1L8EQX4	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.998
A0A1L8EJP8	A0A1L8F8E2	A0A1L8EJP8	A0A1L8F8E2	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.999
A0A1L8EJP8	A0A1L8F9R5	A0A1L8EJP8	A0A1L8F9R5	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Uncharacterized protein.	0.999
A0A1L8EJP8	A0A1L8FNR9	A0A1L8EJP8	A0A1L8FNR9	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Uncharacterized protein.	0.999
A0A1L8EJP8	A0A1L8G5I7	A0A1L8EJP8	A0A1L8G5I7	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Uncharacterized protein.	0.998
A0A1L8EJP8	A0A1L8GBF9	A0A1L8EJP8	A0A1L8GBF9	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
A0A1L8EJP8	A0A1L8GJ00	A0A1L8EJP8	A0A1L8GJ00	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	S5 DRBM domain-containing protein.	0.998
A0A1L8EJP8	A0A1L8GUP1	A0A1L8EJP8	A0A1L8GUP1	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.	0.999
A0A1L8EJP8	A0A1L8H046	A0A1L8EJP8	A0A1L8H046	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Uncharacterized protein.	0.994
A0A1L8EJP8	MGC82136	A0A1L8EJP8	Q6DJJ7	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	MGC82136 protein.	0.999
A0A1L8EJP8	Rps17.S	A0A1L8EJP8	A0A1L8GT87	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Uncharacterized protein.	0.998
A0A1L8EJP8	Rps19.S	A0A1L8EJP8	A0A310TRG4	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Uncharacterized protein.	0.999
A0A1L8EJP8	Rps29.S	A0A1L8EJP8	A0A1L8F058	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	Uncharacterized protein.	0.999
A0A1L8EJP8	Rps7	A0A1L8EJP8	A0A1L8G5E7	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.	0.999
A0A1L8EJP8	dhx29	A0A1L8EJP8	A0A1L8I2C1	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	ATP-dependent RNA helicase DHX29; ATP-binding RNA helicase involved in translation initiation. Part of the 43S pre-initiation complex that is required for efficient initiation on mRNAs of higher eukaryotes with structured 5'-UTRs by promoting efficient NTPase-dependent 48S complex formation. Specifically binds to the 40S ribosome near the mRNA entrance. Does not possess a processive helicase activity; Belongs to the DEAD box helicase family. DEAH subfamily.	0.461
A0A1L8EJP8	fau	A0A1L8EJP8	A0A1L8GCW7	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
A0A1L8EJP8	fau-2	A0A1L8EJP8	Q4KLF0	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999