STRINGSTRING
slf1 slf1 parp3 parp3 setmar setmar A0A1L8GSW6 A0A1L8GSW6 A0A1L8GW81 A0A1L8GW81 tp53bp1 tp53bp1 A0A1L8HBA4 A0A1L8HBA4 rnf169 rnf169 arpc2-b arpc2-b arpc5-b arpc5-b arpc5-a arpc5-a arpc4 arpc4 arpc5-c arpc5-c narf narf arpc2-a arpc2-a arpc3-a arpc3-a wdr70 wdr70 A0A1L8I2B2 A0A1L8I2B2 A0A1L8GNC2 A0A1L8GNC2 A0A1L8HV81 A0A1L8HV81 A0A1L8HV78 A0A1L8HV78 A0A1L8HV66 A0A1L8HV66 smarcad1 smarcad1 rnf169-2 rnf169-2 A0A1L8EU46 A0A1L8EU46 samhd1 samhd1 A0A1L8EU76 A0A1L8EU76 actr3-b actr3-b arpc1a-b arpc1a-b A0A1L8F537 A0A1L8F537 ints3 ints3 iffo1 iffo1 pnkp pnkp A0A1L8FHJ6 A0A1L8FHJ6 iffo1-2 iffo1-2 arpc1a-a arpc1a-a actr3-a actr3-a arpc3-b arpc3-b A0A1L8FJB7 A0A1L8FJB7 poll poll A0A1L8FPD4 A0A1L8FPD4 A0A1L8FU98 A0A1L8FU98 rnf138 rnf138 A0A1L8G061 A0A1L8G061 A0A1L8G0I6 A0A1L8G0I6 A0A1L8G1M7 A0A1L8G1M7 rnf168 rnf168 aplf aplf ufl1 ufl1 rnf168-2 rnf168-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
slf1ANK_REP_REGION domain-containing protein. (904 aa)
parp3Poly [ADP-ribose] polymerase. (547 aa)
setmarUncharacterized protein. (275 aa)
A0A1L8GSW6Uncharacterized protein. (2175 aa)
A0A1L8GW81Uncharacterized protein. (167 aa)
tp53bp1Uncharacterized protein. (2179 aa)
A0A1L8HBA4Uncharacterized protein. (103 aa)
rnf169Uncharacterized protein. (483 aa)
arpc2-bActin-related protein 2/3 complex subunit 2-B; Actin-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility (By similarity). In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (Probable). The Arp2/3 complex promotes homologous r [...] (300 aa)
arpc5-bActin-related protein 2/3 complex subunit 5-B; Component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF) (By similarity). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility (By similarity). In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (Probable). The Arp2/3 complex promotes homologous [...] (152 aa)
arpc5-aActin-related protein 2/3 complex subunit 5-A; Component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (By similarity). The Arp2/3 complex promotes homologous recombination (HR) repair [...] (150 aa)
arpc4Actin-related protein 2/3 complex subunit 4; Actin-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (Probable). The Arp2/3 complex promotes homologous recombination (HR) [...] (168 aa)
arpc5-cActin-related protein 2/3 complex subunit 5-C; Component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility (By similarity). In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (By similarity). The Arp2/3 complex promotes homologous recombinat [...] (150 aa)
narfNarf protein. (222 aa)
arpc2-aActin-related protein 2/3 complex subunit 2-A; Actin-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (By similarity). The Arp2/3 complex promotes homologous recombinatio [...] (300 aa)
arpc3-aActin-related protein 2/3 complex subunit 3-A; Component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (Probable). The Arp2/3 complex promotes homologous recombination (HR) repair in re [...] (178 aa)
wdr70WD_REPEATS_REGION domain-containing protein. (627 aa)
A0A1L8I2B2Uncharacterized protein. (248 aa)
A0A1L8GNC2FAM35_C domain-containing protein. (787 aa)
A0A1L8HV81Helicase C-terminal domain-containing protein. (260 aa)
A0A1L8HV78Helicase ATP-binding domain-containing protein. (241 aa)
A0A1L8HV66CUE domain-containing protein. (479 aa)
smarcad1Uncharacterized protein. (1001 aa)
rnf169-2Uncharacterized protein. (496 aa)
A0A1L8EU46HD domain-containing protein. (476 aa)
samhd1Uncharacterized protein. (632 aa)
A0A1L8EU76HD domain-containing protein. (270 aa)
actr3-bActin-related protein 3-B; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility (By similarity). Seems to contact the pointed end of the daughter actin filament (By similarity). In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damag [...] (418 aa)
arpc1a-bActin-related protein 2/3 complex subunit 1A-B; Probably functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (By similarity). In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (By similarity). (370 aa)
A0A1L8F537Uncharacterized protein. (965 aa)
ints3Uncharacterized protein. (1018 aa)
iffo1IF rod domain-containing protein; Belongs to the intermediate filament family. (487 aa)
pnkpFHA_2 domain-containing protein. (594 aa)
A0A1L8FHJ6IF rod domain-containing protein; Belongs to the intermediate filament family. (427 aa)
iffo1-2IF rod domain-containing protein; Belongs to the intermediate filament family. (487 aa)
arpc1a-aActin-related protein 2/3 complex subunit 1A-A; Probably functions as component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks (By similarity). In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (Probable). (370 aa)
actr3-aActin-related protein 3-A; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament (By similarity). In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (Probable [...] (418 aa)
arpc3-bActin-related protein 2/3 complex subunit 3-B; Component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA (By similarity). The Arp2/3 complex promotes homologous recombination (HR) repair [...] (178 aa)
A0A1L8FJB7Uncharacterized protein. (1021 aa)
pollBRCT domain-containing protein; Belongs to the DNA polymerase type-X family. (577 aa)
A0A1L8FPD4IF rod domain-containing protein; Belongs to the intermediate filament family. (472 aa)
A0A1L8FU98ANK_REP_REGION domain-containing protein. (651 aa)
rnf138zf-Di19 domain-containing protein. (126 aa)
A0A1L8G0611-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma; Mediates the production of the second messenger molecules diacylglycerol (DAG) and inositol 1,4,5-trisphosphate (IP3). Plays an important role in the regulation of intracellular signaling cascades. (1305 aa)
A0A1L8G0I6Uncharacterized protein. (1423 aa)
A0A1L8G1M7Uncharacterized protein. (134 aa)
rnf168E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (554 aa)
aplfUncharacterized protein. (510 aa)
ufl1Uncharacterized protein. (795 aa)
rnf168-2E3 ubiquitin-protein ligase RNF168; E3 ubiquitin-protein ligase required for accumulation of repair proteins to sites of DNA damage. Acts with UBE2N/UBC13 to amplify the RNF8-dependent histone ubiquitination. Recruited to sites of DNA damage at double-strand breaks (DSBs) by binding to ubiquitinated histone H2A and ubiquitinates histone H2A and H2AX, leading to amplify the RNF8-dependent H2A ubiquitination and promoting the formation of 'Lys-63'-linked ubiquitin conjugates. This leads to concentrate ubiquitinated histones H2A and H2AX at DNA lesions to the threshold required for recrui [...] (565 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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