186 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8ELR0	Uncharacterized protein. (206 aa)
	A0A1L8ENK9	Uncharacterized protein. (208 aa)
	rab5d	Uncharacterized protein. (213 aa)
	A0A1L8EQP4	Uncharacterized protein. (209 aa)
	A0A1L8ER89	Uncharacterized protein. (201 aa)
	rem1	Uncharacterized protein. (280 aa)
	rab5c	Uncharacterized protein. (215 aa)
	nkiras2	Uncharacterized protein. (190 aa)
	A0A1L8ETE1	Uncharacterized protein. (202 aa)
	rab37	Uncharacterized protein. (218 aa)
	ras-dva2	Uncharacterized protein. (209 aa)
	A0A1L8EV40	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (707 aa)
	ralb-2	Uncharacterized protein. (206 aa)
	rab40c	SOCS box domain-containing protein. (286 aa)
	rhot2	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (617 aa)
	rasd1	Uncharacterized protein. (283 aa)
	A0A1L8EYZ7	Uncharacterized protein. (201 aa)
	rab15	Uncharacterized protein. (212 aa)
	A0A1L8EZY4	Uncharacterized protein. (211 aa)
	A0A1L8F1U3	Uncharacterized protein. (199 aa)
	A0A1L8F2A7	Uncharacterized protein. (201 aa)
	rhogl.1	Uncharacterized protein. (191 aa)
	rab39b	Uncharacterized protein. (213 aa)
	arhgap35	Uncharacterized protein. (1476 aa)
	XG28K	Uncharacterized protein. (243 aa)
	arhgap5	Uncharacterized protein. (1498 aa)
	A0A1L8F4Z6	Uncharacterized protein. (221 aa)
	A0A1L8F5Q8	Uncharacterized protein. (716 aa)
	A0A1L8F6P3	Uncharacterized protein. (201 aa)
	A0A1L8F6X6	Uncharacterized protein. (210 aa)
	rhogl.1-2	Uncharacterized protein. (191 aa)
	A0A1L8F792	Uncharacterized protein. (242 aa)
	rab39b-2	Uncharacterized protein. (213 aa)
	arhgap35-2	Uncharacterized protein. (1480 aa)
	rab15-2	Uncharacterized protein. (212 aa)
	arhgap5-2	Uncharacterized protein. (1495 aa)
	A0A1L8FGA0	Uncharacterized protein. (191 aa)
	A0A1L8FGY5	Uncharacterized protein. (242 aa)
	kras	Uncharacterized protein. (186 aa)
	rhobtb1	Uncharacterized protein. (691 aa)
	A0A1L8FP55	Uncharacterized protein. (249 aa)
	A0A1L8FQH6	Uncharacterized protein. (184 aa)
	nkiras1	Uncharacterized protein. (203 aa)
	Rab5a.L	Uncharacterized protein. (216 aa)
	rab31	Uncharacterized protein. (194 aa)
	A0A1L8FSN7	Uncharacterized protein. (243 aa)
	gem	Uncharacterized protein. (304 aa)
	A0A1L8FZ34	Uncharacterized protein. (211 aa)
	gem-2	Uncharacterized protein. (305 aa)
	A0A1L8G1C6	Uncharacterized protein. (205 aa)
	A0A1L8G5V8	Uncharacterized protein. (205 aa)
	rab32	Uncharacterized protein. (222 aa)
	A0A1L8GAX7	Uncharacterized protein. (182 aa)
	A0A1L8GB84	Uncharacterized protein. (208 aa)
	A0A1L8GC72	Uncharacterized protein. (196 aa)
	rras2	Uncharacterized protein. (198 aa)
	A0A1L8GFW8	Uncharacterized protein. (217 aa)
	A0A1L8GGN2	Uncharacterized protein. (266 aa)
	A0A1L8GH65	Uncharacterized protein. (192 aa)
	A0A1L8GHD2	Uncharacterized protein. (193 aa)
	A0A1L8GJ91	Uncharacterized protein. (240 aa)
	A0A1L8GLS8	Uncharacterized protein. (198 aa)
	ift27	Uncharacterized protein. (186 aa)
	rap2c-2	Rap2c-prov protein. (183 aa)
	hras	Small G-protein H-Ras. (189 aa)
	kras-3	LOC397771 protein. (186 aa)
	rala	Ras related small G protein RAL-A. (206 aa)
	rac3	RAC1 protein. (192 aa)
	rnd1-2	Small Rho-like GTPase Rnd1. (232 aa)
	MGC131054	MGC131054 protein. (216 aa)
	rab32-2	MGC130912 protein. (222 aa)
	rab3d	Rab3d protein. (217 aa)
	rap2c	MGC114990 protein. (183 aa)
	MGC114680	MGC114680 protein. (278 aa)
	Q52KZ2_XENLA	Uncharacterized protein. (213 aa)
	rac1	MGC114731 protein. (192 aa)
	rab11b.2	LOC496163 protein. (218 aa)
	diras3	LOC495976 protein. (198 aa)
	rab3a	Rab3a-prov protein. (220 aa)
	krasl	Uncharacterized protein. (187 aa)
	rhebl1-2	LOC495056 protein. (184 aa)
	rab40c-2	Rab40 protein. (286 aa)
	rab14	LOC494665 protein. (215 aa)
	LOC494642	LOC494642 protein. (218 aa)
	rab27a	LOC494641 protein. (221 aa)
	rab11a	MGC84419 protein. (216 aa)
	MGC84213	MGC84213 protein. (225 aa)
	kras-2	Uncharacterized protein. (187 aa)
	rab40b	MGC85390 protein. (278 aa)
	rab24	MGC85288 protein. (203 aa)
	rab8b	MGC85265 protein. (207 aa)
	rab8b-2	Rab8b-prov protein. (207 aa)
	rhou	Rac-2 protein. (243 aa)
	rit1	Rit1-prov protein. (215 aa)
	rab7a	Rab7-prov protein. (207 aa)
	rab27b	MGC80016 protein. (218 aa)
	rab33a	MGC84415 protein. (215 aa)
	rab23	MGC82152 protein. (238 aa)
	rab3b	MGC84786 protein. (217 aa)
	MGC84778	MGC84778 protein. (225 aa)
	rerg	MGC84355 protein. (199 aa)
	rab25	MGC84182 protein. (216 aa)
	diras2	MGC83985 protein. (199 aa)
	cracr2a	EF-hand domain-containing protein. (718 aa)
	rasl12	Uncharacterized protein. (273 aa)
	A0A1L8GSL2	Uncharacterized protein. (235 aa)
	A0A1L8GSM8	Uncharacterized protein. (656 aa)
	rab21	Uncharacterized protein. (220 aa)
	rab19	Uncharacterized protein. (213 aa)
	cracr2a-2	EF-hand domain-containing protein. (718 aa)
	A0A1L8H0S2	Uncharacterized protein. (656 aa)
	A0A1L8H0V4	Uncharacterized protein. (235 aa)
	rhobtb2	Uncharacterized protein. (786 aa)
	rab34	Uncharacterized protein. (260 aa)
	Rap1a	Uncharacterized protein. (185 aa)
	A0A1L8H6N1	Uncharacterized protein. (193 aa)
	rab7b	Uncharacterized protein. (201 aa)
	A0A1L8H7L9	Uncharacterized protein. (206 aa)
	rasl10b	Uncharacterized protein. (203 aa)
	rab5b	Uncharacterized protein. (215 aa)
	A0A1L8H9V1	Uncharacterized protein. (1966 aa)
	rasl11a	Uncharacterized protein. (239 aa)
	rab38	Uncharacterized protein. (212 aa)
	A0A1L8HBF6	Uncharacterized protein. (191 aa)
	rab34-2	Uncharacterized protein. (259 aa)
	Rab44.L	EF-hand domain-containing protein. (867 aa)
	A0A1L8HE83	Uncharacterized protein. (206 aa)
	rhebl1	Uncharacterized protein. (184 aa)
	rasl11a-2	Uncharacterized protein. (239 aa)
	rab38-2	Uncharacterized protein. (211 aa)
	A0A1L8HJW4	Uncharacterized protein. (203 aa)
	A0A1L8HK45	Uncharacterized protein. (696 aa)
	rhoh	Uncharacterized protein. (191 aa)
	rasl11b	Uncharacterized protein. (247 aa)
	rab33b	Uncharacterized protein. (226 aa)
	A0A1L8HN53	Uncharacterized protein. (198 aa)
	A0A1L8HNE7	Uncharacterized protein. (218 aa)
	A0A1L8HNH9	Uncharacterized protein. (220 aa)
	rab8a	Uncharacterized protein. (207 aa)
	A0A1L8HP99	Uncharacterized protein. (720 aa)
	A0A1L8HPE1	Uncharacterized protein. (199 aa)
	Rem2.S	Uncharacterized protein. (293 aa)
	A0A1L8HTI4	Uncharacterized protein. (221 aa)
	rhoh-2	Uncharacterized protein. (190 aa)
	Rab33b.L	Uncharacterized protein. (226 aa)
	A0A1L8HWG2	Uncharacterized protein. (198 aa)
	Rem2.L	Uncharacterized protein. (292 aa)
	A0A1L8HZJ7	Uncharacterized protein. (215 aa)
	rasl10a	Uncharacterized protein. (199 aa)
	rab35l	Uncharacterized protein. (201 aa)
	rab36	Uncharacterized protein. (264 aa)
	rhobtb3	Uncharacterized protein. (590 aa)
	A0A1L8I2D9	Uncharacterized protein. (227 aa)
	A0A310TNK4	Uncharacterized protein. (721 aa)
	rasl10b-2	Rasl10b protein. (203 aa)
	LOC100037231	LOC100037231 protein. (209 aa)
	rab13	LOC100158399 protein. (201 aa)
	rhob	MGC131029 protein. (196 aa)
	rab6b	MGC83971 protein. (208 aa)
	rab18-2	RAB18 protein. (206 aa)
	rhoj	MGC83410 protein. (215 aa)
	rasd2	MGC81985 protein. (266 aa)
	rab27a-2	MGC80943 protein. (221 aa)
	LOC398404	LOC398404 protein. (209 aa)
	rab7b-2	MGC80651 protein. (201 aa)
	rab29	MGC80435 protein. (204 aa)
	rhobtb1-2	MGC80424 protein. (691 aa)
	MGC80266	MGC80266 protein. (208 aa)
	rab9a	Rab9a-b protein. (201 aa)
	rab2b	MGC78967 protein. (215 aa)
	rap1a	MGC80662 protein. (185 aa)
	rnd3	MGC83857 protein. (244 aa)
	Q6NRU1_XENLA	Uncharacterized protein. (183 aa)
	rap2b	Small GTPase Rap2. (182 aa)
	rnd3-2	MGC83149 protein. (244 aa)
	rab9a-2	Rab9a-a protein. (201 aa)
	rab21-2	MGC68816 protein. (221 aa)
	rab7a-2	MGC68523 protein. (207 aa)
	rab10	MGC68629 protein. (200 aa)
	rhog	MGC68933 protein. (191 aa)
	rhoa	MGC64296 protein. (193 aa)
	rhoc	MGC52893 protein. (193 aa)
	rnd1	MGC53710 protein. (232 aa)
	rap2a	Rap-2-prov protein. (183 aa)
	rab1a	Rab1-prov protein. (204 aa)
	Rab4a	Rab4a-prov protein. (213 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ELR0	A0A1L8F2A7	A0A1L8ELR0	A0A1L8F2A7	Uncharacterized protein.	Uncharacterized protein.	0.495
A0A1L8ELR0	A0A1L8F5Q8	A0A1L8ELR0	A0A1L8F5Q8	Uncharacterized protein.	Uncharacterized protein.	0.407
A0A1L8ELR0	A0A1L8F6P3	A0A1L8ELR0	A0A1L8F6P3	Uncharacterized protein.	Uncharacterized protein.	0.497
A0A1L8ELR0	Rab4a	A0A1L8ELR0	Q7ZXI8	Uncharacterized protein.	Rab4a-prov protein.	0.450
A0A1L8ELR0	rab14	A0A1L8ELR0	Q640I3	Uncharacterized protein.	LOC494665 protein.	0.523
A0A1L8ELR0	rab18-2	A0A1L8ELR0	Q6GM52	Uncharacterized protein.	RAB18 protein.	0.404
A0A1L8ELR0	rab31	A0A1L8ELR0	A0A1L8FSM9	Uncharacterized protein.	Uncharacterized protein.	0.489
A0A1L8ELR0	rab36	A0A1L8ELR0	A0A1L8I0F5	Uncharacterized protein.	Uncharacterized protein.	0.408
A0A1L8ELR0	rab7b	A0A1L8ELR0	A0A1L8H751	Uncharacterized protein.	Uncharacterized protein.	0.443
A0A1L8ELR0	rab7b-2	A0A1L8ELR0	Q6GP64	Uncharacterized protein.	MGC80651 protein.	0.445
A0A1L8ELR0	rab9a	A0A1L8ELR0	Q6GQ88	Uncharacterized protein.	Rab9a-b protein.	0.485
A0A1L8ELR0	rab9a-2	A0A1L8ELR0	Q6NU20	Uncharacterized protein.	Rab9a-a protein.	0.485
A0A1L8ENK9	rnd1	A0A1L8ENK9	Q7ZX47	Uncharacterized protein.	MGC53710 protein.	0.469
A0A1L8ENK9	rnd1-2	A0A1L8ENK9	Q9W761	Uncharacterized protein.	Small Rho-like GTPase Rnd1.	0.469
A0A1L8ENK9	rnd3	A0A1L8ENK9	Q6NRF5	Uncharacterized protein.	MGC83857 protein.	0.404
A0A1L8ENK9	rnd3-2	A0A1L8ENK9	Q6NTN8	Uncharacterized protein.	MGC83149 protein.	0.404
A0A1L8EQP4	rab19	A0A1L8EQP4	A0A1L8GW69	Uncharacterized protein.	Uncharacterized protein.	0.401
A0A1L8ER89	A0A1L8EYZ7	A0A1L8ER89	A0A1L8EYZ7	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8ER89	rab14	A0A1L8ER89	Q640I3	Uncharacterized protein.	LOC494665 protein.	0.448
A0A1L8ER89	rab35l	A0A1L8ER89	A0A1L8I076	Uncharacterized protein.	Uncharacterized protein.	0.901