48 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8FDJ0	Cyclic nucleotide-binding domain-containing protein. (1635 aa)
	A0A1L8FA96	Uncharacterized protein. (986 aa)
	A0A1L8F5S9	Uncharacterized protein. (1337 aa)
	A0A1L8F011	Uncharacterized protein. (994 aa)
	prkar1b-2	Uncharacterized protein. (380 aa)
	A0A1L8EWR2	Uncharacterized protein. (1107 aa)
	A0A1L8GR53	Uncharacterized protein. (1649 aa)
	mpi	Mannose-6-phosphate isomerase. (424 aa)
	A0A1L8GTB1	Cyclic nucleotide-binding domain-containing protein. (1042 aa)
	A0A1L8GZ80	Uncharacterized protein. (406 aa)
	A0A1L8H018	Cyclic nucleotide-binding domain-containing protein. (1034 aa)
	mpi-2	Mannose-6-phosphate isomerase. (418 aa)
	A0A1L8H8R5	Cyclic nucleotide-binding domain-containing protein. (740 aa)
	cnga3	Cyclic nucleotide-binding domain-containing protein. (679 aa)
	A0A1L8HHS1	Uncharacterized protein. (1000 aa)
	A0A1L8HL43	Cyclic nucleotide-binding domain-containing protein. (714 aa)
	A0A1L8HNN9	Cyclic nucleotide-binding domain-containing protein. (902 aa)
	Hcn1.S	Cyclic nucleotide-binding domain-containing protein. (841 aa)
	cnga1	Cyclic nucleotide-binding domain-containing protein. (706 aa)
	Rapgef2.L	Uncharacterized protein. (1647 aa)
	A0A1L8HXS6	Cyclic nucleotide-binding domain-containing protein. (899 aa)
	A0A1L8I2P4	Uncharacterized protein. (475 aa)
	Hcn1.L	Cyclic nucleotide-binding domain-containing protein. (837 aa)
	A0A1L8I2R1	Uncharacterized protein. (471 aa)
	A0A310TRI6	Uncharacterized protein. (819 aa)
	prkar1a	MGC82149 protein. (381 aa)
	prkar1a-2	Prkar1a protein. (381 aa)
	hif1an	MGC84481 protein. (352 aa)
	cdo1	Cysteine dioxygenase. (201 aa)
	pir	MGC53094 protein; Belongs to the pirin family. (290 aa)
	A0A1L8FF79	cGMP-dependent protein kinase. (763 aa)
	A0A1L8EL61	Uncharacterized protein. (1060 aa)
	A0A1L8EPB7	Cyclic nucleotide-binding domain-containing protein. (1189 aa)
	A0A1L8EPM4	Uncharacterized protein. (1115 aa)
	prkar1b	Uncharacterized protein. (380 aa)
	kcnh4-2	Uncharacterized protein. (1081 aa)
	A0A1L8EW44	Cyclic nucleotide-binding domain-containing protein. (1188 aa)
	A0A1L8GPR3	Uncharacterized protein. (404 aa)
	A0A1L8GHR4	Uncharacterized protein. (405 aa)
	bves-2	Uncharacterized protein. (349 aa)
	haao	3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family. (282 aa)
	bves	Uncharacterized protein. (347 aa)
	Cngb3.L	Cyclic nucleotide-binding domain-containing protein. (743 aa)
	A0A1L8FUU7	Cyclic nucleotide-binding domain-containing protein. (594 aa)
	A0A1L8FK17	cGMP-dependent protein kinase. (763 aa)
	A0A1L8FEK2	Uncharacterized protein. (819 aa)
	ado	Uncharacterized protein. (250 aa)
	prkg1	cGMP-dependent protein kinase. (673 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8GR53	Rapgef2.L	A0A1L8GR53	A0A1L8HUD8	Uncharacterized protein.	Uncharacterized protein.	0.595
A0A1L8H8R5	Cngb3.L	A0A1L8H8R5	A0A1L8FZD8	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.838
A0A1L8HL43	Cngb3.L	A0A1L8HL43	A0A1L8FZD8	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.932
Cngb3.L	A0A1L8H8R5	A0A1L8FZD8	A0A1L8H8R5	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.838
Cngb3.L	A0A1L8HL43	A0A1L8FZD8	A0A1L8HL43	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.932
Cngb3.L	cnga1	A0A1L8FZD8	A0A1L8HTY9	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.932
Cngb3.L	cnga3	A0A1L8FZD8	A0A1L8HGU0	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.837
Rapgef2.L	A0A1L8GR53	A0A1L8HUD8	A0A1L8GR53	Uncharacterized protein.	Uncharacterized protein.	0.595
ado	cdo1	A0A1L8FE74	Q6PA86	Uncharacterized protein.	Cysteine dioxygenase.	0.536
bves	bves-2	A0A1L8G302	A0A1L8G9I3	Uncharacterized protein.	Uncharacterized protein.	0.900
bves-2	bves	A0A1L8G9I3	A0A1L8G302	Uncharacterized protein.	Uncharacterized protein.	0.900
cdo1	ado	Q6PA86	A0A1L8FE74	Cysteine dioxygenase.	Uncharacterized protein.	0.536
cnga1	Cngb3.L	A0A1L8HTY9	A0A1L8FZD8	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.932
cnga3	Cngb3.L	A0A1L8HGU0	A0A1L8FZD8	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.837
mpi	mpi-2	A0A1L8GT78	A0A1L8H020	Mannose-6-phosphate isomerase.	Mannose-6-phosphate isomerase.	0.900
mpi-2	mpi	A0A1L8H020	A0A1L8GT78	Mannose-6-phosphate isomerase.	Mannose-6-phosphate isomerase.	0.900
prkar1a	prkar1a-2	Q6DJJ2	Q6INK7	MGC82149 protein.	Prkar1a protein.	0.451
prkar1a-2	prkar1a	Q6INK7	Q6DJJ2	Prkar1a protein.	MGC82149 protein.	0.451