42 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	rgs4	RGS domain-containing protein. (242 aa)
	rgs18-2	MGC80762 protein. (236 aa)
	MGC84381	MGC84381 protein. (182 aa)
	rgs5-2	RGS domain-containing protein. (181 aa)
	grk4	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (575 aa)
	grk6-2	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (575 aa)
	axin2-2	MGC81576 protein. (707 aa)
	rgs2	RGS domain-containing protein. (216 aa)
	A0A1L8HZZ6	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (688 aa)
	snx25	Uncharacterized protein. (1044 aa)
	A0A1L8HQ32	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (688 aa)
	grk1-2	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (557 aa)
	grk1	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (557 aa)
	A0A1L8H4X7	Uncharacterized protein. (641 aa)
	grk5l-2	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (594 aa)
	grk6	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (575 aa)
	grk5l	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (594 aa)
	rgs13	RGS domain-containing protein. (164 aa)
	rgs4-2	RGS domain-containing protein. (244 aa)
	Rgs8.L	RGS domain-containing protein. (216 aa)
	rgs16-2	RGS domain-containing protein. (190 aa)
	A0A1L8ENI4	Uncharacterized protein. (815 aa)
	A0A1L8ER10	Uncharacterized protein. (557 aa)
	rgs19	RGS domain-containing protein. (239 aa)
	A0A1L8EUY4	Uncharacterized protein. (818 aa)
	axin1	Uncharacterized protein. (841 aa)
	rgs11	Uncharacterized protein. (683 aa)
	arhgef11-2	Uncharacterized protein. (1593 aa)
	A0A1L8FAI1	Uncharacterized protein. (489 aa)
	arhgef11	Uncharacterized protein. (1606 aa)
	rgs3	RGS domain-containing protein. (331 aa)
	grk5	G protein-coupled receptor kinase; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. (590 aa)
	arhgef12	Uncharacterized protein. (1464 aa)
	axin2	Uncharacterized protein. (707 aa)
	snx13	Uncharacterized protein. (977 aa)
	rgs20	RGS domain-containing protein. (255 aa)
	snx13-2	Uncharacterized protein. (1019 aa)
	rgs22	Uncharacterized protein. (1304 aa)
	rgs17-2	RGS domain-containing protein. (219 aa)
	rgs8	RGS domain-containing protein. (216 aa)
	rgs16	RGS domain-containing protein. (189 aa)
	rgs5	RGS domain-containing protein. (181 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ER10	A0A1L8FAI1	A0A1L8ER10	A0A1L8FAI1	Uncharacterized protein.	Uncharacterized protein.	0.573
A0A1L8ER10	Rgs8.L	A0A1L8ER10	A0A1L8GMQ6	Uncharacterized protein.	RGS domain-containing protein.	0.422
A0A1L8ER10	rgs13	A0A1L8ER10	A0A1L8GNL1	Uncharacterized protein.	RGS domain-containing protein.	0.502
A0A1L8ER10	rgs16	A0A1L8ER10	A0A1L8GGB6	Uncharacterized protein.	RGS domain-containing protein.	0.426
A0A1L8ER10	rgs16-2	A0A1L8ER10	A0A1L8GMM8	Uncharacterized protein.	RGS domain-containing protein.	0.426
A0A1L8ER10	rgs17-2	A0A1L8ER10	A0A1L8G7I8	Uncharacterized protein.	RGS domain-containing protein.	0.448
A0A1L8ER10	rgs18-2	A0A1L8ER10	Q6GP01	Uncharacterized protein.	MGC80762 protein.	0.436
A0A1L8ER10	rgs19	A0A1L8ER10	A0A1L8ET75	Uncharacterized protein.	RGS domain-containing protein.	0.490
A0A1L8ER10	rgs3	A0A1L8ER10	A0A1L8F3N1	Uncharacterized protein.	RGS domain-containing protein.	0.498
A0A1L8ER10	rgs4	A0A1L8ER10	A0A1L8GGH1	Uncharacterized protein.	RGS domain-containing protein.	0.452
A0A1L8ER10	rgs4-2	A0A1L8ER10	A0A1L8GN43	Uncharacterized protein.	RGS domain-containing protein.	0.452
A0A1L8ER10	rgs5	A0A1L8ER10	A0A1L8GGL7	Uncharacterized protein.	RGS domain-containing protein.	0.451
A0A1L8ER10	rgs5-2	A0A1L8ER10	Q6DE67	Uncharacterized protein.	RGS domain-containing protein.	0.451
A0A1L8ER10	rgs8	A0A1L8ER10	A0A1L8GG59	Uncharacterized protein.	RGS domain-containing protein.	0.422
A0A1L8FAI1	A0A1L8ER10	A0A1L8FAI1	A0A1L8ER10	Uncharacterized protein.	Uncharacterized protein.	0.573
A0A1L8FAI1	Rgs8.L	A0A1L8FAI1	A0A1L8GMQ6	Uncharacterized protein.	RGS domain-containing protein.	0.497
A0A1L8FAI1	rgs11	A0A1L8FAI1	A0A1L8EV08	Uncharacterized protein.	Uncharacterized protein.	0.561
A0A1L8FAI1	rgs13	A0A1L8FAI1	A0A1L8GNL1	Uncharacterized protein.	RGS domain-containing protein.	0.590
A0A1L8FAI1	rgs16	A0A1L8FAI1	A0A1L8GGB6	Uncharacterized protein.	RGS domain-containing protein.	0.491
A0A1L8FAI1	rgs16-2	A0A1L8FAI1	A0A1L8GMM8	Uncharacterized protein.	RGS domain-containing protein.	0.491