22 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1L8FDJ0	Cyclic nucleotide-binding domain-containing protein. (1635 aa)
	prkar1b-2	Uncharacterized protein. (380 aa)
	A0A1L8HL43	Cyclic nucleotide-binding domain-containing protein. (714 aa)
	cnga1	Cyclic nucleotide-binding domain-containing protein. (706 aa)
	A0A1L8HXS6	Cyclic nucleotide-binding domain-containing protein. (899 aa)
	cnga3	Cyclic nucleotide-binding domain-containing protein. (679 aa)
	A0A1L8H8R5	Cyclic nucleotide-binding domain-containing protein. (740 aa)
	A0A1L8H018	Cyclic nucleotide-binding domain-containing protein. (1034 aa)
	A0A1L8GZ80	Uncharacterized protein. (406 aa)
	Hcn1.L	Cyclic nucleotide-binding domain-containing protein. (837 aa)
	prkar1a	MGC82149 protein. (381 aa)
	Hcn1.S	Cyclic nucleotide-binding domain-containing protein. (841 aa)
	prkar1b	Uncharacterized protein. (380 aa)
	prkar1a-2	Prkar1a protein. (381 aa)
	A0A1L8HNN9	Cyclic nucleotide-binding domain-containing protein. (902 aa)
	A0A1L8GTB1	Cyclic nucleotide-binding domain-containing protein. (1042 aa)
	A0A1L8GPR3	Uncharacterized protein. (404 aa)
	A0A1L8GHR4	Uncharacterized protein. (405 aa)
	Cngb3.L	Cyclic nucleotide-binding domain-containing protein. (743 aa)
	A0A1L8FK17	cGMP-dependent protein kinase. (763 aa)
	A0A1L8FF79	cGMP-dependent protein kinase. (763 aa)
	prkg1	cGMP-dependent protein kinase. (673 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8H8R5	Cngb3.L	A0A1L8H8R5	A0A1L8FZD8	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.838
A0A1L8HL43	Cngb3.L	A0A1L8HL43	A0A1L8FZD8	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.932
Cngb3.L	A0A1L8H8R5	A0A1L8FZD8	A0A1L8H8R5	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.838
Cngb3.L	A0A1L8HL43	A0A1L8FZD8	A0A1L8HL43	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.932
Cngb3.L	cnga1	A0A1L8FZD8	A0A1L8HTY9	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.932
Cngb3.L	cnga3	A0A1L8FZD8	A0A1L8HGU0	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.837
cnga1	Cngb3.L	A0A1L8HTY9	A0A1L8FZD8	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.932
cnga3	Cngb3.L	A0A1L8HGU0	A0A1L8FZD8	Cyclic nucleotide-binding domain-containing protein.	Cyclic nucleotide-binding domain-containing protein.	0.837
prkar1a	prkar1a-2	Q6DJJ2	Q6INK7	MGC82149 protein.	Prkar1a protein.	0.451
prkar1a-2	prkar1a	Q6INK7	Q6DJJ2	Prkar1a protein.	MGC82149 protein.	0.451