8 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ubc-2	Ubc-prov protein. (609 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	ubc	Uncharacterized protein. (533 aa)
	usp14-2	Ubiquitin carboxyl-terminal hydrolase. (489 aa)
	rps27a	MGC81889 protein. (156 aa)
	uba52	MGC80109 protein. (128 aa)
	A0A1L8F1M8	Ubiquitin-like domain-containing protein. (148 aa)
	usp14	Ubiquitin carboxyl-terminal hydrolase. (490 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8F1M8	A0A1L8G5V1	A0A1L8F1M8	A0A1L8G5V1	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.826
A0A1L8F1M8	rps27a	A0A1L8F1M8	Q6GMC1	Ubiquitin-like domain-containing protein.	MGC81889 protein.	0.826
A0A1L8F1M8	uba52	A0A1L8F1M8	Q6GQF3	Ubiquitin-like domain-containing protein.	MGC80109 protein.	0.813
A0A1L8F1M8	usp14	A0A1L8F1M8	A0A1L8FYP5	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.647
A0A1L8F1M8	usp14-2	A0A1L8F1M8	Q641D7	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.647
A0A1L8G5V1	A0A1L8F1M8	A0A1L8G5V1	A0A1L8F1M8	Ubiquitin-like domain-containing protein.	Ubiquitin-like domain-containing protein.	0.826
A0A1L8G5V1	rps27a	A0A1L8G5V1	Q6GMC1	Ubiquitin-like domain-containing protein.	MGC81889 protein.	0.900
A0A1L8G5V1	uba52	A0A1L8G5V1	Q6GQF3	Ubiquitin-like domain-containing protein.	MGC80109 protein.	0.989
A0A1L8G5V1	ubc	A0A1L8G5V1	A0A1L8HQK4	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.934
A0A1L8G5V1	ubc-2	A0A1L8G5V1	Q7SY79	Ubiquitin-like domain-containing protein.	Ubc-prov protein.	0.934
A0A1L8G5V1	usp14	A0A1L8G5V1	A0A1L8FYP5	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.947
A0A1L8G5V1	usp14-2	A0A1L8G5V1	Q641D7	Ubiquitin-like domain-containing protein.	Ubiquitin carboxyl-terminal hydrolase.	0.947
rps27a	A0A1L8F1M8	Q6GMC1	A0A1L8F1M8	MGC81889 protein.	Ubiquitin-like domain-containing protein.	0.826
rps27a	A0A1L8G5V1	Q6GMC1	A0A1L8G5V1	MGC81889 protein.	Ubiquitin-like domain-containing protein.	0.900
rps27a	uba52	Q6GMC1	Q6GQF3	MGC81889 protein.	MGC80109 protein.	0.992
rps27a	ubc	Q6GMC1	A0A1L8HQK4	MGC81889 protein.	Uncharacterized protein.	0.934
rps27a	ubc-2	Q6GMC1	Q7SY79	MGC81889 protein.	Ubc-prov protein.	0.938
rps27a	usp14	Q6GMC1	A0A1L8FYP5	MGC81889 protein.	Ubiquitin carboxyl-terminal hydrolase.	0.947
rps27a	usp14-2	Q6GMC1	Q641D7	MGC81889 protein.	Ubiquitin carboxyl-terminal hydrolase.	0.947
uba52	A0A1L8F1M8	Q6GQF3	A0A1L8F1M8	MGC80109 protein.	Ubiquitin-like domain-containing protein.	0.813