STRINGSTRING
timm9 timm9 Timm8b.S Timm8b.S timm50-2 timm50-2 Timm8a.L Timm8a.L timm50 timm50 Timm9.S Timm9.S Nup35.L Nup35.L sec61a1-2 sec61a1-2 timm44 timm44 timm13 timm13 nup107 nup107 timm10-2 timm10-2 timm10 timm10 Lmnb2.S Lmnb2.S Timm10b.S Timm10b.S A0A1L8H9I3 A0A1L8H9I3 sec61a1 sec61a1 Nup93.L Nup93.L Tram2.L Tram2.L A0A1L8GAD0 A0A1L8GAD0 tram2 tram2 A0A1L8G4B5 A0A1L8G4B5 eny2-2 eny2-2 eny2 eny2 A0A1L8FT88 A0A1L8FT88 timm8b timm8b Nup85.L Nup85.L nup35 nup35 sec61b sec61b
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
timm9zf-Tim10_DDP domain-containing protein. (89 aa)
Timm8b.Szf-Tim10_DDP domain-containing protein; Belongs to the small Tim family. (94 aa)
timm50-2Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (368 aa)
Timm8a.Lzf-Tim10_DDP domain-containing protein; Belongs to the small Tim family. (87 aa)
timm50Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane. (368 aa)
Timm9.Szf-Tim10_DDP domain-containing protein. (76 aa)
Nup35.LNucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (303 aa)
sec61a1-2Sec61a1 protein. (476 aa)
timm44Mitochondrial import inner membrane translocase subunit TIM44; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the Tim44 family. (451 aa)
timm13Translocase of inner mitochondrial membrane 13 homolog (Yeast); Belongs to the small Tim family. (96 aa)
nup107Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (916 aa)
timm10-2zf-Tim10_DDP domain-containing protein. (104 aa)
timm10zf-Tim10_DDP domain-containing protein. (90 aa)
Lmnb2.SUncharacterized protein; Belongs to the intermediate filament family. (666 aa)
Timm10b.Szf-Tim10_DDP domain-containing protein. (105 aa)
A0A1L8H9I3Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (65 aa)
sec61a1Plug_translocon domain-containing protein. (476 aa)
Nup93.LNuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family. (820 aa)
Tram2.LTranslocating chain-associated membrane protein; Belongs to the TRAM family. (371 aa)
A0A1L8GAD0Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (152 aa)
tram2Translocating chain-associated membrane protein; Belongs to the TRAM family. (371 aa)
A0A1L8G4B5Stress-associated endoplasmic reticulum protein; May interact with target proteins during translocation into the lumen of the endoplasmic reticulum. May protect unfolded target proteins against degradation and facilitate correct glycosylation. Belongs to the RAMP4 family. (134 aa)
eny2-2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (96 aa)
eny2Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (96 aa)
A0A1L8FT88Translocating chain-associated membrane protein; Belongs to the TRAM family. (379 aa)
timm8bzf-Tim10_DDP domain-containing protein; Belongs to the small Tim family. (94 aa)
Nup85.LNuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (882 aa)
nup35Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (331 aa)
sec61bProtein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum. (96 aa)
Your Current Organism:
Xenopus laevis
NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna
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