33 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Rcbtb1.S	BTB domain-containing protein. (600 aa)
	rev1	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1230 aa)
	A0A1L8H4R2	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (584 aa)
	A0A1L8GS29	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (268 aa)
	Rev3l.L	Uncharacterized protein. (3139 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	rev3l	Uncharacterized protein. (3141 aa)
	A0A1L8FTA7	Ubiquitin-like domain-containing protein. (105 aa)
	Mad2l2.S	HORMA domain-containing protein. (233 aa)
	Meiob.L	Uncharacterized protein. (470 aa)
	atad5	AAA domain-containing protein. (1740 aa)
	A0A1L8ENC4	AAA domain-containing protein. (1731 aa)
	pcna	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
	rcbtb2	Chc1l-prov protein. (526 aa)
	rfc5	Rfc5-prov protein. (335 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	rfc4	Replication factor C p37 subunit. (363 aa)
	uba52	MGC80109 protein. (128 aa)
	rps27a	MGC81889 protein. (156 aa)
	rpa3-2	Rpa3-prov protein. (121 aa)
	rpa3	LOC495401 protein. (121 aa)
	rfc3	MGC115007 protein. (356 aa)
	A0A1L8HX68	Ubiquitin-like domain-containing protein. (173 aa)
	Kxd1.L	KxDL domain-containing protein. (195 aa)
	rfc1	Replication factor C subunit 1. (1147 aa)
	Rfc5.S	AAA domain-containing protein. (335 aa)
	ubc	Uncharacterized protein. (533 aa)
	kxd1	KxDL domain-containing protein. (195 aa)
	Rcbtb1.L	BTB domain-containing protein. (600 aa)
	rev1-2	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family. (1237 aa)
	Rfc2.L	AAA domain-containing protein. (359 aa)
	Rpa1.L	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (609 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8ENC4	A0A1L8G5V1	A0A1L8ENC4	A0A1L8G5V1	AAA domain-containing protein.	Ubiquitin-like domain-containing protein.	0.571
A0A1L8ENC4	A0A1L8GS29	A0A1L8ENC4	A0A1L8GS29	AAA domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.968
A0A1L8ENC4	A0A1L8H4R2	A0A1L8ENC4	A0A1L8H4R2	AAA domain-containing protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.774
A0A1L8ENC4	A0A1L8HCZ9	A0A1L8ENC4	A0A1L8HCZ9	AAA domain-containing protein.	Uncharacterized protein.	0.425
A0A1L8ENC4	Mad2l2.S	A0A1L8ENC4	A0A1L8FFM5	AAA domain-containing protein.	HORMA domain-containing protein.	0.724
A0A1L8ENC4	Meiob.L	A0A1L8ENC4	A0A1L8EYN2	AAA domain-containing protein.	Uncharacterized protein.	0.774
A0A1L8ENC4	Rev3l.L	A0A1L8ENC4	A0A1L8G950	AAA domain-containing protein.	Uncharacterized protein.	0.758
A0A1L8ENC4	Rfc2.L	A0A1L8ENC4	A0A1L8HGA4	AAA domain-containing protein.	AAA domain-containing protein.	0.988
A0A1L8ENC4	Rfc5.S	A0A1L8ENC4	A0A1L8HQV3	AAA domain-containing protein.	AAA domain-containing protein.	0.975
A0A1L8ENC4	Rpa1.L	A0A1L8ENC4	A0A1L8HDB4	AAA domain-containing protein.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.774
A0A1L8ENC4	pcna	A0A1L8ENC4	Q9I893	AAA domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.968
A0A1L8ENC4	rev1	A0A1L8ENC4	A0A1L8H8Q0	AAA domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.669
A0A1L8ENC4	rev1-2	A0A1L8ENC4	A0A1L8HGZ7	AAA domain-containing protein.	DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3'-end of a DNA primer in a template- dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents; Belongs to the DNA polymerase type-Y family.	0.669
A0A1L8ENC4	rev3l	A0A1L8ENC4	A0A1L8G2X7	AAA domain-containing protein.	Uncharacterized protein.	0.758
A0A1L8ENC4	rfc1	A0A1L8ENC4	A0A1L8HTJ6	AAA domain-containing protein.	Replication factor C subunit 1.	0.598
A0A1L8ENC4	rfc3	A0A1L8ENC4	Q4QQP4	AAA domain-containing protein.	MGC115007 protein.	0.992
A0A1L8ENC4	rfc4	A0A1L8ENC4	Q76LD2	AAA domain-containing protein.	Replication factor C p37 subunit.	0.990
A0A1L8ENC4	rfc5	A0A1L8ENC4	Q7ZTM5	AAA domain-containing protein.	Rfc5-prov protein.	0.975
A0A1L8ENC4	rpa3	A0A1L8ENC4	Q5U510	AAA domain-containing protein.	LOC495401 protein.	0.577
A0A1L8ENC4	rpa3-2	A0A1L8ENC4	Q6AZP5	AAA domain-containing protein.	Rpa3-prov protein.	0.577