72 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	grb2	Uncharacterized protein. (229 aa)
	adap2	Uncharacterized protein. (379 aa)
	A0A1L8EQC8	Uncharacterized protein. (375 aa)
	A0A1L8EU80	E3 ubiquitin-protein ligase. (852 aa)
	grb2-2	Uncharacterized protein. (229 aa)
	Adap2.L	Uncharacterized protein. (372 aa)
	A0A1L8EZY9	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (433 aa)
	A0A1L8F3B0	Uncharacterized protein. (1205 aa)
	ncstn	Ncstrn_small domain-containing protein. (713 aa)
	A0A1L8F4N0	Uncharacterized protein. (219 aa)
	fndc3c	Uncharacterized protein. (1205 aa)
	psen1	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (433 aa)
	A0A1L8EMM1	E3 ubiquitin-protein ligase. (848 aa)
	aph1a	Uncharacterized protein. (247 aa)
	ncstn-2	Ncstrn_small domain-containing protein. (713 aa)
	kras	Uncharacterized protein. (186 aa)
	A0A1L8FK96	Uncharacterized protein. (358 aa)
	A0A1L8FKB1	Uncharacterized protein. (237 aa)
	A0A1L8FTA7	Ubiquitin-like domain-containing protein. (105 aa)
	A0A1L8FTF3	E3 ubiquitin-protein ligase. (896 aa)
	wwp1	E3 ubiquitin-protein ligase. (919 aa)
	sos1	Uncharacterized protein. (1325 aa)
	psen2	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (449 aa)
	Esr1.S	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (585 aa)
	A0A1L8G3Z7	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1065 aa)
	fndc3b	Uncharacterized protein. (1205 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	A0A1L8G7M0	Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family. (445 aa)
	sos1-2	Uncharacterized protein. (1325 aa)
	A0A1L8GA65	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1009 aa)
	fndc3b-2	Uncharacterized protein. (1204 aa)
	A0A1L8GEH0	Uncharacterized protein. (193 aa)
	A0A1L8GKT2	Uncharacterized protein. (160 aa)
	A0A1L8GKT4	Uncharacterized protein. (194 aa)
	Adap1.L	Uncharacterized protein. (376 aa)
	hbegf	EGF-like domain-containing protein. (196 aa)
	nrg4	EGF-like domain-containing protein. (99 aa)
	cryba1.2	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (209 aa)
	csde1	Uncharacterized protein. (833 aa)
	A0A1L8H940	Uncharacterized protein. (137 aa)
	fndc3a	Uncharacterized protein. (1202 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	A0A1L8HD37	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (219 aa)
	nras	Uncharacterized protein. (189 aa)
	A0A1L8HE12	Uncharacterized protein. (122 aa)
	Csde1.L	Uncharacterized protein. (780 aa)
	stmn1	Stathmin; Belongs to the stathmin family. (145 aa)
	fndc3a-2	Uncharacterized protein. (1200 aa)
	mxd4	BHLH domain-containing protein. (204 aa)
	ereg	Uncharacterized protein. (156 aa)
	Btc.S	EGF-like domain-containing protein. (287 aa)
	A0A1L8HN10	Uncharacterized protein. (376 aa)
	A0A1L8HN17	EGF-like domain-containing protein. (514 aa)
	ubc	Uncharacterized protein. (533 aa)
	Mxd4.L	BHLH domain-containing protein. (204 aa)
	Egf.L	Uncharacterized protein. (1031 aa)
	btc	EGF-like domain-containing protein. (170 aa)
	ereg-2	Uncharacterized protein. (156 aa)
	A0A1L8HW93	Uncharacterized protein. (349 aa)
	A0A1L8HW99	Uncharacterized protein. (576 aa)
	A0A1L8HX68	Ubiquitin-like domain-containing protein. (173 aa)
	psenen	LOC495936 protein. (101 aa)
	krasl	Uncharacterized protein. (187 aa)
	psenen-2	LOC494701 protein. (101 aa)
	kras-2	Uncharacterized protein. (187 aa)
	adap1	MGC80649 protein. (375 aa)
	rps27a	MGC81889 protein. (156 aa)
	uba52	MGC80109 protein. (128 aa)
	esr1	Estrogen receptor; The steroid hormones and their receptors are involved in the regulation of eukaryotic gene expression and affect cellular proliferation and differentiation in target tissues. (585 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	hras	Small G-protein H-Ras. (189 aa)
	kras-3	LOC397771 protein. (186 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EMM1	A0A1L8EU80	A0A1L8EMM1	A0A1L8EU80	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.900
A0A1L8EMM1	A0A1L8FTA7	A0A1L8EMM1	A0A1L8FTA7	E3 ubiquitin-protein ligase.	Ubiquitin-like domain-containing protein.	0.788
A0A1L8EMM1	A0A1L8FTF3	A0A1L8EMM1	A0A1L8FTF3	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.756
A0A1L8EMM1	A0A1L8G5V1	A0A1L8EMM1	A0A1L8G5V1	E3 ubiquitin-protein ligase.	Ubiquitin-like domain-containing protein.	0.926
A0A1L8EMM1	A0A1L8HCZ9	A0A1L8EMM1	A0A1L8HCZ9	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.837
A0A1L8EMM1	A0A1L8HX68	A0A1L8EMM1	A0A1L8HX68	E3 ubiquitin-protein ligase.	Ubiquitin-like domain-containing protein.	0.788
A0A1L8EMM1	grb2	A0A1L8EMM1	A0A1L8EMZ6	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.494
A0A1L8EMM1	grb2-2	A0A1L8EMM1	A0A1L8EUF2	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.494
A0A1L8EMM1	rps27a	A0A1L8EMM1	Q6GMC1	E3 ubiquitin-protein ligase.	MGC81889 protein.	0.926
A0A1L8EMM1	uba52	A0A1L8EMM1	Q6GQF3	E3 ubiquitin-protein ligase.	MGC80109 protein.	0.788
A0A1L8EMM1	ubc	A0A1L8EMM1	A0A1L8HQK4	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.837
A0A1L8EMM1	ubc-2	A0A1L8EMM1	Q7SY79	E3 ubiquitin-protein ligase.	Ubc-prov protein.	0.837
A0A1L8EMM1	wwp1	A0A1L8EMM1	A0A1L8FZF0	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.754
A0A1L8EU80	A0A1L8EMM1	A0A1L8EU80	A0A1L8EMM1	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.900
A0A1L8EU80	A0A1L8FTA7	A0A1L8EU80	A0A1L8FTA7	E3 ubiquitin-protein ligase.	Ubiquitin-like domain-containing protein.	0.788
A0A1L8EU80	A0A1L8FTF3	A0A1L8EU80	A0A1L8FTF3	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.756
A0A1L8EU80	A0A1L8G5V1	A0A1L8EU80	A0A1L8G5V1	E3 ubiquitin-protein ligase.	Ubiquitin-like domain-containing protein.	0.926
A0A1L8EU80	A0A1L8HCZ9	A0A1L8EU80	A0A1L8HCZ9	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.837
A0A1L8EU80	A0A1L8HX68	A0A1L8EU80	A0A1L8HX68	E3 ubiquitin-protein ligase.	Ubiquitin-like domain-containing protein.	0.788
A0A1L8EU80	grb2	A0A1L8EU80	A0A1L8EMZ6	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.494