(32 nodes) ABC transporters in lipid homeostasis network (Xenopus laevis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	abcd2-2	Uncharacterized protein. (731 aa)
	abcd3	70 kDa peroxisomal membrane protein. (657 aa)
	pex3	MGC82731 protein. (372 aa)
	plekhd1	PH domain-containing protein. (498 aa)
	A0A1L8FLG8	ABC transporter domain-containing protein. (639 aa)
	A0A310U729	ABC transmembrane type-1 domain-containing protein. (293 aa)
	ptchd1-2	SSD domain-containing protein. (915 aa)
	abcg1	ABC transporter domain-containing protein. (663 aa)
	ptchd1	SSD domain-containing protein. (914 aa)
	A0A1L8H5E7	ABC transporter domain-containing protein. (664 aa)
	A0A1L8FQV3	Uncharacterized protein. (935 aa)
	A0A310U8H2	Uncharacterized protein. (742 aa)
	A0A310U8U7	ABC transporter domain-containing protein. (639 aa)
	pex19	LOC733180 protein. (286 aa)
	pex19-2	LOC496096 protein. (283 aa)
	atp5if1	MGC82059 protein. (110 aa)
	A0A1L8EM17	Uncharacterized protein. (1610 aa)
	abca3	Uncharacterized protein. (1700 aa)
	A0A1L8ERP1	Uncharacterized protein. (1640 aa)
	A0A1L8ETA7	Uncharacterized protein. (1057 aa)
	A0A1L8ETB2	Uncharacterized protein. (1616 aa)
	A0A1L8ETE7	Uncharacterized protein. (1298 aa)
	abca3-2	Uncharacterized protein. (1700 aa)
	abcd1	Uncharacterized protein. (743 aa)
	A0A1L8EKD4	Uncharacterized protein. (1640 aa)
	abcd2	Uncharacterized protein. (731 aa)
	ptchd4	SSD domain-containing protein. (888 aa)
	smpdl3a	Acid sphingomyelinase-like phosphodiesterase. (450 aa)
	A0A1L8G5C4	Uncharacterized protein. (188 aa)
	A0A1L8G5B5	SSD domain-containing protein. (592 aa)
	A0A1L8G1H7	ABC transporter domain-containing protein. (604 aa)
	Abcg5.S	ABC transporter domain-containing protein. (657 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EKD4	A0A1L8ERP1	A0A1L8EKD4	A0A1L8ERP1	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8EM17	A0A1L8ETB2	A0A1L8EM17	A0A1L8ETB2	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A1L8ERP1	A0A1L8EKD4	A0A1L8ERP1	A0A1L8EKD4	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A1L8ETB2	A0A1L8EM17	A0A1L8ETB2	A0A1L8EM17	Uncharacterized protein.	Uncharacterized protein.	0.901
A0A1L8FLG8	Abcg5.S	A0A1L8FLG8	A0A1L8G1F9	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.888
A0A1L8G1H7	Abcg5.S	A0A1L8G1H7	A0A1L8G1F9	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.999
A0A1L8H5E7	Abcg5.S	A0A1L8H5E7	A0A1L8G1F9	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.888
A0A1L8H5E7	abcg1	A0A1L8H5E7	A0A1L8HCA2	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.900
A0A310U729	abcd3	A0A310U729	Q6IRQ1	ABC transmembrane type-1 domain-containing protein.	70 kDa peroxisomal membrane protein.	0.784
A0A310U729	pex19	A0A310U729	Q0IH62	ABC transmembrane type-1 domain-containing protein.	LOC733180 protein.	0.759
A0A310U729	pex19-2	A0A310U729	Q5PPS3	ABC transmembrane type-1 domain-containing protein.	LOC496096 protein.	0.759
A0A310U729	pex3	A0A310U729	Q6GPP4	ABC transmembrane type-1 domain-containing protein.	MGC82731 protein.	0.766
A0A310U8H2	abcd1	A0A310U8H2	A0A1L8F1M5	Uncharacterized protein.	Uncharacterized protein.	0.900
A0A310U8H2	abcd3	A0A310U8H2	Q6IRQ1	Uncharacterized protein.	70 kDa peroxisomal membrane protein.	0.794
A0A310U8H2	pex19	A0A310U8H2	Q0IH62	Uncharacterized protein.	LOC733180 protein.	0.759
A0A310U8H2	pex19-2	A0A310U8H2	Q5PPS3	Uncharacterized protein.	LOC496096 protein.	0.759
A0A310U8H2	pex3	A0A310U8H2	Q6GPP4	Uncharacterized protein.	MGC82731 protein.	0.773
A0A310U8U7	Abcg5.S	A0A310U8U7	A0A1L8G1F9	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.888
Abcg5.S	A0A1L8FLG8	A0A1L8G1F9	A0A1L8FLG8	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.888
Abcg5.S	A0A1L8G1H7	A0A1L8G1F9	A0A1L8G1H7	ABC transporter domain-containing protein.	ABC transporter domain-containing protein.	0.999