92 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Ikzf3.S	Uncharacterized protein. (511 aa)
	A0A1L8EMM1	E3 ubiquitin-protein ligase. (848 aa)
	ikzf2	Uncharacterized protein. (585 aa)
	Pofut1.L	Uncharacterized protein. (380 aa)
	Ikzf3.L	Uncharacterized protein. (513 aa)
	rfng	Beta-1,3-N-acetylglucosaminyltransferase. (364 aa)
	A0A1L8EU80	E3 ubiquitin-protein ligase. (852 aa)
	ikzf2-2	Uncharacterized protein. (585 aa)
	Lfng.L	Beta-1,3-N-acetylglucosaminyltransferase. (373 aa)
	Dlgap5.S	Uncharacterized protein. (833 aa)
	jag2	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1223 aa)
	Dlk1.S	Uncharacterized protein. (372 aa)
	A0A1L8F0V0	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (650 aa)
	Notch1.S	Uncharacterized protein. (2524 aa)
	A0A1L8F1R5	Homeobox domain-containing protein. (433 aa)
	crb2	Uncharacterized protein. (1472 aa)
	A0A1L8F3K5	Homeobox domain-containing protein. (422 aa)
	A0A1L8F3L0	Uncharacterized protein. (2377 aa)
	notch1	Uncharacterized protein. (2521 aa)
	A0A1L8F6G6	Homeobox domain-containing protein. (342 aa)
	A0A1L8F6H3	PBC domain-containing protein. (90 aa)
	pbx2	Homeobox domain-containing protein. (422 aa)
	Dlk1.L	Uncharacterized protein. (382 aa)
	jag2-2	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1227 aa)
	A0A1L8FAF7	Uncharacterized protein. (995 aa)
	dll4	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (675 aa)
	neurl1	Uncharacterized protein. (555 aa)
	A0A1L8FG47	Uncharacterized protein. (110 aa)
	Dtx4.L	Uncharacterized protein. (828 aa)
	hes4	Uncharacterized protein. (277 aa)
	mib1	Uncharacterized protein. (1015 aa)
	hey1	Uncharacterized protein. (294 aa)
	Ywhaz.L	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (245 aa)
	ikzf1	Uncharacterized protein. (567 aa)
	mib1-2	Uncharacterized protein. (1011 aa)
	hey1-2	Uncharacterized protein. (298 aa)
	Ywhaz.S	14_3_3 domain-containing protein; Belongs to the 14-3-3 family. (245 aa)
	dll1	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (721 aa)
	hes1	Uncharacterized protein. (267 aa)
	dner	Uncharacterized protein. (678 aa)
	hes6.2	Uncharacterized protein. (187 aa)
	A0A1L8G5V1	Ubiquitin-like domain-containing protein. (156 aa)
	hey2	Uncharacterized protein. (334 aa)
	hes1-2	Uncharacterized protein. (267 aa)
	hes6.2-2	Uncharacterized protein. (183 aa)
	ehf	Uncharacterized protein. (296 aa)
	pbx1	Homeobox domain-containing protein. (454 aa)
	A0A1L8GIR9	PNT domain-containing protein. (282 aa)
	A0A1L8GN15	Homeobox domain-containing protein. (454 aa)
	A0A1L8GN74	Uncharacterized protein. (1390 aa)
	A0A1L8GRM4	Uncharacterized protein. (2165 aa)
	neurl1b	Uncharacterized protein. (552 aa)
	neurl1b-2	Uncharacterized protein. (552 aa)
	A0A1L8H2E9	Uncharacterized protein. (2404 aa)
	cryba1.2	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (209 aa)
	Poglut1.L	CAP10 domain-containing protein. (154 aa)
	A0A1L8H5Q9	CAP10 domain-containing protein. (234 aa)
	elf3	Uncharacterized protein. (376 aa)
	dtx2	Uncharacterized protein. (590 aa)
	ikzf4	Uncharacterized protein. (556 aa)
	A0A1L8HAL3	Uncharacterized protein. (2812 aa)
	A0A1L8HBZ5	CAP10 domain-containing protein. (298 aa)
	A0A1L8HCZ9	Uncharacterized protein. (307 aa)
	A0A1L8HD37	Uncharacterized protein; Belongs to the beta/gamma-crystallin family. (219 aa)
	elf3-2	Uncharacterized protein. (381 aa)
	dtx2-2	Uncharacterized protein. (592 aa)
	A0A1L8HHX3	Uncharacterized protein. (690 aa)
	A0A1L8HIV6	Uncharacterized protein. (133 aa)
	A0A1L8HIW3	Uncharacterized protein. (2762 aa)
	A0A1L8HLN3	Uncharacterized protein. (2798 aa)
	A0A1L8HLU1	MamL-1 domain-containing protein. (1090 aa)
	ubc	Uncharacterized protein. (533 aa)
	tmed2	GOLD domain-containing protein. (201 aa)
	tacc3-2	TACC_C domain-containing protein. (881 aa)
	A0A1L8HUJ2	Uncharacterized protein. (2819 aa)
	A0A1L8HUJ3	Uncharacterized protein. (420 aa)
	A0A1L8HUL3	Uncharacterized protein. (668 aa)
	Egf.L	Uncharacterized protein. (1031 aa)
	dtx1	Uncharacterized protein. (623 aa)
	Hes4.L	Orange domain-containing protein. (171 aa)
	Ikzf1.S	C2H2-type domain-containing protein. (273 aa)
	LOC397855	Beta-1,3-N-acetylglucosaminyltransferase. (375 aa)
	dtx1-2	XDTX1 protein. (623 aa)
	cntn1	Contactin A. (1009 aa)
	cntn1-2	Contactin/F3/F11. (1005 aa)
	X-Delta-2	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (642 aa)
	dner-2	Dnera protein. (678 aa)
	rps27a	MGC81889 protein. (156 aa)
	ubc-2	Ubc-prov protein. (609 aa)
	tmed2-2	Rnp24-prov protein. (201 aa)
	neurl1-2	Neuralized. (555 aa)
	dll1-2	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (721 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8EMM1	A0A1L8EU80	A0A1L8EMM1	A0A1L8EU80	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.900
A0A1L8EMM1	A0A1L8G5V1	A0A1L8EMM1	A0A1L8G5V1	E3 ubiquitin-protein ligase.	Ubiquitin-like domain-containing protein.	0.926
A0A1L8EMM1	A0A1L8HCZ9	A0A1L8EMM1	A0A1L8HCZ9	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.837
A0A1L8EMM1	Dtx4.L	A0A1L8EMM1	A0A1L8FKN6	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.614
A0A1L8EMM1	dtx1	A0A1L8EMM1	A0A1L8HZV8	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.614
A0A1L8EMM1	dtx1-2	A0A1L8EMM1	B7ZRU0	E3 ubiquitin-protein ligase.	XDTX1 protein.	0.614
A0A1L8EMM1	dtx2	A0A1L8EMM1	A0A1L8H8A0	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.614
A0A1L8EMM1	dtx2-2	A0A1L8EMM1	A0A1L8HFZ6	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.614
A0A1L8EMM1	rps27a	A0A1L8EMM1	Q6GMC1	E3 ubiquitin-protein ligase.	MGC81889 protein.	0.926
A0A1L8EMM1	ubc	A0A1L8EMM1	A0A1L8HQK4	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.837
A0A1L8EMM1	ubc-2	A0A1L8EMM1	Q7SY79	E3 ubiquitin-protein ligase.	Ubc-prov protein.	0.837
A0A1L8EU80	A0A1L8EMM1	A0A1L8EU80	A0A1L8EMM1	E3 ubiquitin-protein ligase.	E3 ubiquitin-protein ligase.	0.900
A0A1L8EU80	A0A1L8G5V1	A0A1L8EU80	A0A1L8G5V1	E3 ubiquitin-protein ligase.	Ubiquitin-like domain-containing protein.	0.926
A0A1L8EU80	A0A1L8HCZ9	A0A1L8EU80	A0A1L8HCZ9	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.837
A0A1L8EU80	Dtx4.L	A0A1L8EU80	A0A1L8FKN6	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.614
A0A1L8EU80	dtx1	A0A1L8EU80	A0A1L8HZV8	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.614
A0A1L8EU80	dtx1-2	A0A1L8EU80	B7ZRU0	E3 ubiquitin-protein ligase.	XDTX1 protein.	0.614
A0A1L8EU80	dtx2	A0A1L8EU80	A0A1L8H8A0	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.614
A0A1L8EU80	dtx2-2	A0A1L8EU80	A0A1L8HFZ6	E3 ubiquitin-protein ligase.	Uncharacterized protein.	0.614
A0A1L8EU80	rps27a	A0A1L8EU80	Q6GMC1	E3 ubiquitin-protein ligase.	MGC81889 protein.	0.926