26 items (Xenopus laevis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	mpst	Uncharacterized protein. (299 aa)
	tst-2	Uncharacterized protein. (294 aa)
	A0A1L8GHA4	Sulfurtransferase. (230 aa)
	tst	Uncharacterized protein. (294 aa)
	txn2	Thioredoxin domain-containing protein. (223 aa)
	Cth.S	Uncharacterized protein. (257 aa)
	tstd3-2	Rhodanese domain-containing protein. (169 aa)
	Gadl1.L	Uncharacterized protein. (522 aa)
	A0A1L8FUQ5	Uncharacterized protein. (333 aa)
	Gadl1.S	Uncharacterized protein. (516 aa)
	A0A1L8FQ64	Uncharacterized protein. (285 aa)
	Ado.L	Uncharacterized protein. (264 aa)
	ado	Uncharacterized protein. (250 aa)
	Tstd1.S	Rhodanese domain-containing protein. (142 aa)
	A0A1L8ETL5	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (290 aa)
	ethe1	Ethe1-prov protein. (255 aa)
	txn2-2	Txn2-prov protein. (170 aa)
	cdo1	Cysteine dioxygenase. (201 aa)
	cth	LOC494673 protein. (398 aa)
	A0A310UHU0	Uncharacterized protein. (148 aa)
	Cdo1.S	Cysteine dioxygenase. (201 aa)
	Csad.L	Uncharacterized protein. (522 aa)
	Suox.L	Cytochrome b5 heme-binding domain-containing protein. (568 aa)
	Suox.S	Cytochrome b5 heme-binding domain-containing protein. (568 aa)
	sqor	Pyr_redox_2 domain-containing protein. (450 aa)
	Sqrdl-b	Pyr_redox_2 domain-containing protein. (450 aa)

Your Current Organism:

Xenopus laevis

NCBI taxonomy Id: 8355
Other names: African clawed frog, Bufo laevis, X. laevis, clawed frog, common platanna, platanna

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1L8FQ64	Cth.S	A0A1L8FQ64	A0A1L8GFK5	Uncharacterized protein.	Uncharacterized protein.	0.691
A0A1L8FQ64	Sqrdl-b	A0A1L8FQ64	A0A1L8GSV3	Uncharacterized protein.	Pyr_redox_2 domain-containing protein.	0.520
A0A1L8FQ64	Suox.L	A0A1L8FQ64	A0A1L8HHY9	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.609
A0A1L8FQ64	Suox.S	A0A1L8FQ64	A0A1L8H9N4	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.609
A0A1L8FQ64	Tstd1.S	A0A1L8FQ64	A0A1L8F5C8	Uncharacterized protein.	Rhodanese domain-containing protein.	0.495
A0A1L8FQ64	cth	A0A1L8FQ64	Q640H4	Uncharacterized protein.	LOC494673 protein.	0.691
A0A1L8FQ64	sqor	A0A1L8FQ64	A0A1L8H0P4	Uncharacterized protein.	Pyr_redox_2 domain-containing protein.	0.520
A0A1L8FQ64	tstd3-2	A0A1L8FQ64	A0A1L8G905	Uncharacterized protein.	Rhodanese domain-containing protein.	0.496
A0A1L8FQ64	txn2	A0A1L8FQ64	A0A1L8GGT7	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.547
A0A1L8FQ64	txn2-2	A0A1L8FQ64	Q7ZYG6	Uncharacterized protein.	Txn2-prov protein.	0.547
A0A1L8FUQ5	Cth.S	A0A1L8FUQ5	A0A1L8GFK5	Uncharacterized protein.	Uncharacterized protein.	0.967
A0A1L8FUQ5	Sqrdl-b	A0A1L8FUQ5	A0A1L8GSV3	Uncharacterized protein.	Pyr_redox_2 domain-containing protein.	0.520
A0A1L8FUQ5	Suox.L	A0A1L8FUQ5	A0A1L8HHY9	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.959
A0A1L8FUQ5	Suox.S	A0A1L8FUQ5	A0A1L8H9N4	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.959
A0A1L8FUQ5	Tstd1.S	A0A1L8FUQ5	A0A1L8F5C8	Uncharacterized protein.	Rhodanese domain-containing protein.	0.495
A0A1L8FUQ5	cth	A0A1L8FUQ5	Q640H4	Uncharacterized protein.	LOC494673 protein.	0.967
A0A1L8FUQ5	ethe1	A0A1L8FUQ5	Q8AVQ9	Uncharacterized protein.	Ethe1-prov protein.	0.929
A0A1L8FUQ5	sqor	A0A1L8FUQ5	A0A1L8H0P4	Uncharacterized protein.	Pyr_redox_2 domain-containing protein.	0.520
A0A1L8FUQ5	tstd3-2	A0A1L8FUQ5	A0A1L8G905	Uncharacterized protein.	Rhodanese domain-containing protein.	0.496
A0A1L8FUQ5	txn2	A0A1L8FUQ5	A0A1L8GGT7	Uncharacterized protein.	Thioredoxin domain-containing protein.	0.547